RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 ALDH7A1P49419 539 aaKnown RBP13.27□□□□□ -0.29
TGFB1-204ENST00000600196 SCNN1GP51170 649 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 KCNH2Q12809 1159 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 UPP1Q16831 310 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 SGSM1Q2NKQ1 1148 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 VWA3BQ502W6 1294 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 SEZ6Q53EL9 994 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 DPH6Q7L8W6 267 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 TTC39CQ8N584 583 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 ZSWIM2Q8NEG5 633 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 ZFP42Q96MM3 310 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 ZMAT2Q96NC0 199 aaKnown RBP13.27□□□□□ -0.29
TGFB1-204ENST00000600196 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 MIOSQ9NXC5 875 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 MSRAQ9UJ68 235 aa13.27□□□□□ -0.29
TGFB1-204ENST00000600196 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 FMO5P49326 533 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 MXI1P50539 228 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 TFAMQ00059 246 aaKnown RBP13.26□□□□□ -0.29
TGFB1-204ENST00000600196 MYO1EQ12965 1108 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 C1orf220Q5T0J3 134 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 EFCAB13Q8IY85 973 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 FBXL13Q8NEE6 735 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 JAKMIP2Q96AA8 810 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 IQCDQ96DY2 449 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 OXCT2Q9BYC2 517 aaPredicted RBP13.26□□□□□ -0.29
TGFB1-204ENST00000600196 CWH43Q9H720 699 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 NRDE2Q9H7Z3 1164 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 KLK14Q9P0G3 267 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 LZTS1Q9Y250 596 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 PCDHB12Q9Y5F1 795 aa13.26□□□□□ -0.29
TGFB1-204ENST00000600196 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 CAPN15O75808 1086 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 POMCP01189 267 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 GALTP07902 379 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 NFICP08651 508 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 P4HA1P13674 534 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 RFX1P22670 979 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 AARSP49588 968 aaKnown RBP eCLIP13.25□□□□□ -0.29
TGFB1-204ENST00000600196 PLCB3Q01970 1234 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 UBE3AQ05086 875 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 TRPC3Q13507 836 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 KRT31Q15323 416 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 TCERG1LQ5VWI1 586 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 C1orf127Q8N9H9 656 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 CXorf38Q8TB03 319 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 PLEKHO2Q8TD55 490 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 ZNF558Q96NG5 402 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 RAB20Q9NX57 234 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 GDAP2Q9NXN4 497 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 INPP5FQ9Y2H2 1132 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 RALGAPA2Q2PPJ7 1873 aa13.25□□□□□ -0.29
TGFB1-204ENST00000600196 A0A1B0GTH6 734 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 A0A1W2PQC6 194 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 LGALS16A8MUM7 142 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 PHACTR2O75167 634 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 DDHD2O94830 711 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 C1RP00736 705 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 BMPR1AP36894 532 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
TGFB1-204ENST00000600196 ERVK-21P61565 698 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 DLG4P78352 724 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 KRT17Q04695 432 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 PPP3CAQ08209 521 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 NCOA4Q13772 614 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 SV2CQ496J9 727 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 DCAF17Q5H9S7 520 aaPredicted RBP13.24□□□□□ -0.29
TGFB1-204ENST00000600196 WDR44Q5JSH3 913 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 MIIPQ5JXC2 388 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 C9orf57Q5W0N0 161 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 PDXDC1Q6P996 788 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 GBP6Q6ZN66 633 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 APTXQ7Z2E3 356 aaKnown RBP13.24□□□□□ -0.29
TGFB1-204ENST00000600196 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 OR5B17Q8NGF7 314 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 EEF2KMTQ96G04 330 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 ERGIC2Q96RQ1 377 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 DNAI2Q9GZS0 605 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
TGFB1-204ENST00000600196 SPG21Q9NZD8 308 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 FBXL5Q9UKA1 691 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 DSEQ9UL01 958 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
TGFB1-204ENST00000600196 FNDC1Q4ZHG4 1894 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-204ENST00000600196 PODXLO00592 558 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms