RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 MGAT3Q09327 533 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 GPS2Q13227 327 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 SURF1Q15526 300 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 ASIC2Q16515 512 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 SLC27A1Q6PCB7 646 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 CTAGE6Q86UF2 777 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 FAM228AQ86W67 206 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 CTAGE4Q8IX94 777 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 MTMR12Q9C0I1 747 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 HAUS4Q9H6D7 363 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 PAK6Q9NQU5 681 aaPredicted RBP16.34■□□□□ 0.21
VRK3-218ENST00000600031 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
VRK3-218ENST00000600031 PIN4Q9Y237 131 aaKnown RBP16.34■□□□□ 0.21
VRK3-218ENST00000600031 LACTBL1A8MY62 500 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 M0QZ92 97 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 POLR3GO15318 223 aaPredicted RBP16.33■□□□□ 0.21
VRK3-218ENST00000600031 SERPING1P05155 500 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 RFX1P22670 979 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 AXLP30530 894 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 THPOP40225 353 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 PTPN11Q06124 597 aaPredicted RBP16.33■□□□□ 0.21
VRK3-218ENST00000600031 DCAF4L1Q3SXM0 396 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 CCDC170Q8IYT3 715 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 HELQQ8TDG4 1101 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 DHX38Q92620 1227 aaKnown RBP16.33■□□□□ 0.21
VRK3-218ENST00000600031 TATDN2Q93075 761 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 CCDC42Q96M95 316 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.21
VRK3-218ENST00000600031 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.21
VRK3-218ENST00000600031 DAAM1Q9Y4D1 1078 aa16.33■□□□□ 0.21
VRK3-218ENST00000600031 IL18RAPO95256 599 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 SOX5P35711 763 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 GRM5P41594 1212 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 STAT1P42224 750 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 PIK3CAP42336 1068 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 TFAMQ00059 246 aaKnown RBP16.33■□□□□ 0.2
VRK3-218ENST00000600031 KYAT1Q16773 422 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 DUOXA2Q1HG44 320 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 TDRD12Q587J7 1177 aaKnown RBP16.33■□□□□ 0.2
VRK3-218ENST00000600031 ZNF662Q6ZS27 426 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 HDXQ7Z353 690 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 KREMEN1Q96MU8 473 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 NT5C1BQ96P26 610 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 STARD7Q9NQZ5 370 aa16.33■□□□□ 0.2
VRK3-218ENST00000600031 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 GFPT2O94808 682 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 CST3P01034 146 aaPredicted RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 CYLC1P35663 651 aaPredicted RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 AP3M2P53677 418 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 POU5F1Q01860 360 aaKnown RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 PTK7Q13308 1070 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 BEND6Q5SZJ8 279 aaPredicted RBP16.32■□□□□ 0.2
VRK3-218ENST00000600031 TRAPPC11Q7Z392 1133 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 ACAP3Q96P50 834 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 DEFB118Q96PH6 123 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 OSBPL7Q9BZF2 842 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 NOD1Q9Y239 953 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 HES2Q9Y543 173 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
VRK3-218ENST00000600031 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 ZNF263O14978 683 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 PHACTR2O75167 634 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 NFICP08651 508 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 CCL5P13501 91 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 KRT83P78385 493 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 NCOA4Q13772 614 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 TRIM71Q2Q1W2 868 aaKnown RBP16.31■□□□□ 0.2
VRK3-218ENST00000600031 UBXN11Q5T124 520 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 TXLNBQ8N3L3 684 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 SNTG2Q9NY99 539 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 EIF3CLB5ME19 914 aaKnown RBP16.31■□□□□ 0.2
VRK3-218ENST00000600031 KBTBD13C9JR72 458 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 EVI5O60447 810 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 ZC3H11AO75152 810 aaKnown RBP eCLIP16.31■□□□□ 0.2
VRK3-218ENST00000600031 RPLP2P05387 115 aaKnown RBP16.31■□□□□ 0.2
VRK3-218ENST00000600031 PRKCIP41743 596 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 KIF11P52732 1056 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 AMPD2Q01433 879 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 JADE1Q6IE81 842 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 APBB1IPQ7Z5R6 666 aaPredicted RBP16.31■□□□□ 0.2
VRK3-218ENST00000600031 TMEM130Q8N3G9 435 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 EIF3CQ99613 913 aaKnown RBP16.31■□□□□ 0.2
VRK3-218ENST00000600031 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
VRK3-218ENST00000600031 ST3GAL5Q9UNP4 418 aa16.31■□□□□ 0.2
VRK3-218ENST00000600031 CITO14578 2027 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
VRK3-218ENST00000600031 ERICH4A6NGS2 130 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms