RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PEX3P56589 373 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 ROR1Q01973 937 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 VARS2Q5ST30 1063 aaKnown RBP23.2■■□□□ 1.3
PNKP-212ENST00000599454 CCDC83Q8IWF9 413 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 CEP120Q8N960 986 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 IGSF22Q8N9C0 903 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 SNX29Q8TEQ0 813 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 DRC1Q96MC2 740 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 C17orf75Q9HAS0 396 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 ARHGAP28Q9P2N2 729 aa23.2■■□□□ 1.3
PNKP-212ENST00000599454 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
PNKP-212ENST00000599454 H7C4K7 107 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 I3L4J1 428 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 PODXLO00592 558 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 PRRG1O14668 218 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 SPTLC1O15269 473 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 MCF2P10911 925 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 KCNE1P15382 129 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 RPL9P32969 192 aaKnown RBP23.19■■□□□ 1.3
PNKP-212ENST00000599454 SOX4Q06945 474 aaPredicted RBP23.19■■□□□ 1.3
PNKP-212ENST00000599454 ZBTB41Q5SVQ8 909 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 KIAA2013Q8IYS2 634 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 ELSPBP1Q96BH3 223 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 MCRS1Q96EZ8 462 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 ACAP3Q96P50 834 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 DNM3Q9UQ16 869 aa23.19■■□□□ 1.3
PNKP-212ENST00000599454 MRPS17Q9Y2R5 130 aaKnown RBP23.19■■□□□ 1.3
PNKP-212ENST00000599454 ZNF197O14709 1029 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 TBC1D4O60343 1298 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 MICAL2O94851 1124 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 ATF2P15336 505 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 SLC5A9Q2M3M2 681 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 TPRG1Q6ZUI0 275 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 TCEAL8Q8IYN2 117 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 FAM184AQ8NB25 1140 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 DNASE1L2Q92874 299 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 CLDN23Q96B33 292 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 RMDN1Q96DB5 314 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 KMT5AQ9NQR1 393 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 CNTN3Q9P232 1028 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 KCNG1Q9UIX4 513 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 MAFFQ9ULX9 164 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 MTF2Q9Y483 593 aaPredicted RBP23.18■■□□□ 1.3
PNKP-212ENST00000599454 NUB1Q9Y5A7 615 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 PCDHGA2Q9Y5H1 932 aa23.18■■□□□ 1.3
PNKP-212ENST00000599454 WDR27A2RRH5 827 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 LAD1O00515 517 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 HIP1RO75146 1068 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 PROZP22891 400 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 RPS9P46781 194 aaKnown RBP23.17■■□□□ 1.3
PNKP-212ENST00000599454 OSTNP61366 133 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 KRT79Q5XKE5 535 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 TPGS2Q68CL5 300 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 MPZL3Q6UWV2 235 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 ZNF852Q6ZMS4 543 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 SUMF1Q8NBK3 374 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 ZSCAN31Q96LW9 406 aaPredicted RBP23.17■■□□□ 1.3
PNKP-212ENST00000599454 ZMAT2Q96NC0 199 aaKnown RBP23.17■■□□□ 1.3
PNKP-212ENST00000599454 TCHPQ9BT92 498 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 TIPINQ9BVW5 301 aa23.17■■□□□ 1.3
PNKP-212ENST00000599454 TARS2Q9BW92 718 aaKnown RBP23.17■■□□□ 1.3
PNKP-212ENST00000599454 TICRRQ7Z2Z1 1910 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 CEBPBP17676 345 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.34e-8■□□□□ 9.6
PNKP-212ENST00000599454 PTGDRQ13258 359 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 MRPL58Q14197 206 aaKnown RBP23.16■■□□□ 1.3
PNKP-212ENST00000599454 PUM1Q14671 1186 aaKnown RBP eCLIP23.16■■□□□ 1.3
PNKP-212ENST00000599454 PRSS36Q5K4E3 855 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 TAS1R3Q7RTX0 852 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 DAW1Q8N136 415 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 CYP4F11Q9HBI6 524 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 INSL5Q9Y5Q6 135 aa23.16■■□□□ 1.3
PNKP-212ENST00000599454 E9PMD0 336 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 TARSP26639 723 aaKnown RBP23.15■■□□□ 1.3
PNKP-212ENST00000599454 CSTF1Q05048 431 aaKnown RBP23.15■■□□□ 1.3
PNKP-212ENST00000599454 NBR1Q14596 966 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 TANGO2Q6ICL3 276 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 RINT1Q6NUQ1 792 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 DGLUCYQ7Z3D6 616 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 ELMOD1Q8N336 334 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 APPL2Q8NEU8 664 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 ATRIPQ8WXE1 791 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 SUSD3Q96L08 255 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 CORO1BQ9BR76 489 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 PLA2G2FQ9BZM2 168 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 ZFP14Q9HCL3 533 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 SH2B1Q9NRF2 756 aaPredicted RBP23.15■■□□□ 1.3
PNKP-212ENST00000599454 FBXL5Q9UKA1 691 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 COL4A2P08572 1712 aa23.15■■□□□ 1.3
PNKP-212ENST00000599454 DMXL1Q9Y485 3027 aa23.14■■□□□ 1.3
PNKP-212ENST00000599454 ABLIM1O14639 778 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 CD72P21854 359 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 PRPHP41219 470 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 ARPP19P56211 112 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 CTXN3Q4LDR2 81 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 ZNF280DQ6N043 979 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 C1orf186Q6ZWK4 172 aa23.14■■□□□ 1.29
PNKP-212ENST00000599454 PDZD4Q76G19 769 aaPredicted RBP23.14■■□□□ 1.29
PNKP-212ENST00000599454 GPR161Q8N6U8 529 aaKnown RBP23.14■■□□□ 1.29
PNKP-212ENST00000599454 LEMD2Q8NC56 503 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms