RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FGFR1OPO95684 399 aaKnown RBP15.54■□□□□ 0.08
VRK3-213ENST00000597215 ITGB1P05556 798 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 TNNI1P19237 187 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 LRPAP1P30533 357 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 CLCNKBP51801 687 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 TFAMQ00059 246 aaKnown RBP15.54■□□□□ 0.08
VRK3-213ENST00000597215 PLCB3Q01970 1234 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 UBE3AQ05086 875 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 TYRO3Q06418 890 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 ENPEPQ07075 957 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 GPM6BQ13491 265 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 UPP1Q16831 310 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 PARD3BQ8TEW8 1205 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 GDPD5Q8WTR4 605 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 CCDC127Q96BQ5 260 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 CGRRF1Q99675 332 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 PAAF1Q9BRP4 392 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 INTS13Q9NVM9 706 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 MARCH5Q9NX47 278 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 DPP3Q9NY33 737 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 STK39Q9UEW8 545 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
VRK3-213ENST00000597215 LZTS1Q9Y250 596 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 PLXNA4Q9HCM2 1894 aa15.54■□□□□ 0.08
VRK3-213ENST00000597215 TMEM189-UBE2V1I3L0A0 370 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 TADA2AO75478 443 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 KIF4AO95239 1232 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 SLC34A2O95436 690 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 TNNC2P02585 160 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 CCDC192P0DO97 292 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 VAMP7P51809 220 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 GUCY2FP51841 1108 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 AP3M2P53677 418 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 BFSP1Q12934 665 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 GRIN2CQ14957 1233 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 TPD52L1Q16890 204 aaPredicted RBP15.53■□□□□ 0.08
VRK3-213ENST00000597215 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
VRK3-213ENST00000597215 DCLRE1AQ6PJP8 1040 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 FILIP1Q7Z7B0 1213 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 TMEM173Q86WV6 379 aaPredicted RBP15.53■□□□□ 0.08
VRK3-213ENST00000597215 BCL7CQ8WUZ0 217 aaPredicted RBP15.53■□□□□ 0.08
VRK3-213ENST00000597215 RABGGTAQ92696 567 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 FAM161BQ96MY7 647 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 MTMR12Q9C0I1 747 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 PRDM12Q9H4Q4 367 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 ADAM28Q9UKQ2 775 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
VRK3-213ENST00000597215 PTPRJQ12913 1337 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 SYCE3A1L190 88 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 LRRIQ3A6PVS8 624 aaPredicted RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 F8W810 466 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 B3GAT3O94766 335 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 GNA14O95837 355 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 CLDN10P78369 228 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 DDX53Q86TM3 631 aaKnown RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 DEFB123Q8N688 67 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 OR5B17Q8NGF7 314 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 SPPL3Q8TCT6 385 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 PLEKHO2Q8TD55 490 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 HASPINQ8TF76 798 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 SRRTQ9BXP5 876 aaKnown RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 LMAN2LQ9H0V9 348 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 GZF1Q9H116 711 aaPredicted RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 METTL14Q9HCE5 456 aaKnown RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 ALG13Q9NP73 1137 aaKnown RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 ITGA11Q9UKX5 1188 aa15.52■□□□□ 0.08
VRK3-213ENST00000597215 R3HCC1Q9Y3T6 440 aaKnown RBP15.52■□□□□ 0.08
VRK3-213ENST00000597215 SF3B1O75533 1304 aaKnown RBP eCLIP15.51■□□□□ 0.07
VRK3-213ENST00000597215 ANO9A1A5B4 782 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 RFXAPO00287 272 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 IKBKBO14920 756 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 GRM6O15303 877 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 PAX3P23760 479 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 ELAVL2Q12926 359 aaKnown RBP15.51■□□□□ 0.07
VRK3-213ENST00000597215 PTPROQ16827 1216 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 ZSCAN23Q3MJ62 389 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 CCDC40Q4G0X9 1142 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 C9orf57Q5W0N0 161 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 FUT10Q6P4F1 479 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 C11orf57Q6ZUT1 292 aaPredicted RBP15.51■□□□□ 0.07
VRK3-213ENST00000597215 Q7L0L9 218 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 FRMD5Q7Z6J6 570 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 C1orf127Q8N9H9 656 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 C3orf58Q8NDZ4 430 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 POF1BQ8WVV4 589 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 BORCS6Q96GS4 357 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 ZNF560Q96MR9 790 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 MED15Q96RN5 788 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 POP1Q99575 1024 aaKnown RBP15.51■□□□□ 0.07
VRK3-213ENST00000597215 DNAJC25Q9H1X3 360 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 ARMCX3Q9UH62 379 aaPredicted RBP15.51■□□□□ 0.07
VRK3-213ENST00000597215 NUB1Q9Y5A7 615 aa15.51■□□□□ 0.07
VRK3-213ENST00000597215 PIRO00625 290 aa15.5■□□□□ 0.07
VRK3-213ENST00000597215 TRAPPC3O43617 180 aa15.5■□□□□ 0.07
VRK3-213ENST00000597215 LPXNO60711 386 aa15.5■□□□□ 0.07
VRK3-213ENST00000597215 ITGB3P05106 788 aa15.5■□□□□ 0.07
VRK3-213ENST00000597215 POLR2BP30876 1174 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms