RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 MAPK13O15264 365 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 MAPTP10636 758 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 CENPCQ03188 943 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 TMEM63BQ5T3F8 832 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 NAIF1Q69YI7 327 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 LLGL2Q6P1M3 1020 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 CAPN12Q6ZSI9 719 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 DDX1Q92499 740 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 RIT2Q99578 217 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 SLCO1B3Q9NPD5 702 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 USH1CQ9Y6N9 552 aa18.48■□□□□ 0.55
ARHGEF1-213ENST00000595897 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 ATP5HO75947 161 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 SLC1A1P43005 524 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 P3H1Q32P28 736 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 HP1BP3Q5SSJ5 553 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 PARD3BQ8TEW8 1205 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 UTP4Q969X6 686 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 IWS1Q96ST2 819 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 TMEM8AQ9HCN3 771 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 SAYSD1Q9NPB0 183 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 TMEM150BA6NC51 233 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 GTF2BQ00403 316 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 SPARCL1Q14515 664 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 ZYXQ15942 572 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 FAM102BQ5T8I3 360 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 MCOLN2Q8IZK6 566 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 DDX27Q96GQ7 796 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 FAM81BQ96LP2 452 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 CFAP57Q96MR6 1250 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 CSRNP1Q96S65 589 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 PI4K2AQ9BTU6 479 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 STARD13Q9Y3M8 1113 aa18.47■□□□□ 0.55
ARHGEF1-213ENST00000595897 MROH7Q68CQ1 1323 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 NSFP46459 744 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 CCNHP51946 323 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 VPS72Q15906 364 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 NAF1Q96HR8 494 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 MXRA8Q9BRK3 442 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 KCNH7Q9NS40 1196 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 USTQ9Y2C2 406 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 PMM2O15305 246 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 POTEJP0CG39 1038 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 GPC3P51654 580 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 RNASELQ05823 741 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 CCNG2Q16589 344 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 B3GNT9Q6UX72 402 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 C4orf33Q8N1A6 199 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 AGGF1Q8N302 714 aaeCLIP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 ACER1Q8TDN7 264 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 LRRC8CQ8TDW0 803 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 SMC6Q96SB8 1091 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 LRMDAQ9H2I8 198 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 TRABDQ9H4I3 376 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 TDRD3Q9H7E2 651 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 NKX1-2Q9UD57 310 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 CHKBQ9Y259 395 aa18.46■□□□□ 0.55
ARHGEF1-213ENST00000595897 SMNDC1O75940 238 aaKnown RBP eCLIP18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 WFS1O76024 890 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 ASMTLO95671 621 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 ITGB5P18084 799 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 RIBC1Q8N443 379 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 KIFC3Q9BVG8 833 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 ADAM33Q9BZ11 813 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 OSBPL8Q9BZF1 889 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 KIF9Q9HAQ2 790 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 EXOC7Q9UPT5 735 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 BTAF1O14981 1849 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 DCTN3O75935 186 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 CA4P22748 312 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 ADSSP30520 456 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 QARSP47897 775 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 YARSP54577 528 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 RAD23BP54727 409 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 PARP6Q2NL67 630 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 TRABD2AQ86V40 505 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 MAML1Q92585 1016 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 RNPEPL1Q9HAU8 725 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 PPP1R12AO14974 1030 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 CD58P19256 250 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 CNGA1P29973 690 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 YWHABP31946 246 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 NR1H3Q13133 447 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 ARMC2Q8NEN0 867 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 NUDCD1Q96RS6 583 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 VPS37BQ9H9H4 285 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 USP20Q9Y2K6 914 aa18.45■□□□□ 0.54
ARHGEF1-213ENST00000595897 POLRMTO00411 1230 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 CALB2P22676 271 aa18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 CEP128Q6ZU80 1094 aa18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 SV2AQ7L0J3 742 aa18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 PODNQ7Z5L7 613 aa18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 USP37Q86T82 979 aa18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 RHOT1Q8IXI2 618 aa18.44■□□□□ 0.54
ARHGEF1-213ENST00000595897 CHURC1Q8WUH1 139 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms