RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 MAFAQ8NHW3 353 aaPredicted RBP15.56■□□□□ 0.08
LIG1-208ENST00000595758 HASPINQ8TF76 798 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 PPM1EQ8WY54 764 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 DHTKD1Q96HY7 919 aaPredicted RBP15.56■□□□□ 0.08
LIG1-208ENST00000595758 NSUN3Q9H649 340 aaKnown RBP15.56■□□□□ 0.08
LIG1-208ENST00000595758 PCDHGC5Q9Y5F6 944 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 SF3B1O75533 1304 aaKnown RBP eCLIP15.56■□□□□ 0.084e-6■■■■■ 34.5
LIG1-208ENST00000595758 PSMA7O14818 248 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 CXCL14O95715 111 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 EFEMP2O95967 443 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 SOD2P04179 222 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 CTSAP10619 480 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 NR2F2P24468 414 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 LRPAP1P30533 357 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 CYP24A1Q07973 514 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 SMC1AQ14683 1233 aaKnown RBP15.55■□□□□ 0.08
LIG1-208ENST00000595758 NFIL3Q16649 462 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 EDRF1Q3B7T1 1238 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 ZCWPW2Q504Y3 356 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 TCEAL5Q5H9L2 206 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 PLPP4Q5VZY2 271 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 CENPPQ6IPU0 288 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 CD300LGQ6UXG3 332 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 TAS1R1Q7RTX1 841 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 EFCAB13Q8IY85 973 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
LIG1-208ENST00000595758 PPP2R3CQ969Q6 453 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 MFSD14AQ96MC6 490 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 TSG101Q99816 390 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 HERC2P3Q9BVR0 1158 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 GPR62Q9BZJ7 368 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 ZBP1Q9H171 429 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 DPP3Q9NY33 737 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 FRMD4BQ9Y2L6 1034 aa15.55■□□□□ 0.08
LIG1-208ENST00000595758 PLXNA4Q9HCM2 1894 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 PPP1R3GB7ZBB8 358 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 TRAPPC3O43617 180 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 CD44P16070 742 aaKnown RBP15.54■□□□□ 0.08
LIG1-208ENST00000595758 IGFBP6P24592 240 aaPredicted RBP15.54■□□□□ 0.08
LIG1-208ENST00000595758 CA8P35219 290 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 ELAVL2Q12926 359 aaKnown RBP15.54■□□□□ 0.08
LIG1-208ENST00000595758 ADAM9Q13443 819 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 PSMD6Q15008 389 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 USP41Q3LFD5 358 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 FAM171A1Q5VUB5 890 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 CEP135Q66GS9 1140 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 ANKRD40Q6AI12 368 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 KLHL10Q6JEL2 608 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 KIAA1841Q6NSI8 718 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 RNF168Q8IYW5 571 aaPredicted RBP15.54■□□□□ 0.08
LIG1-208ENST00000595758 TMEM130Q8N3G9 435 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 MRPL43Q8N983 215 aaKnown RBP15.54■□□□□ 0.08
LIG1-208ENST00000595758 C3orf58Q8NDZ4 430 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 CCDC127Q96BQ5 260 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 NUB1Q9Y5A7 615 aa15.54■□□□□ 0.08
LIG1-208ENST00000595758 C2orf71A6NGG8 1288 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 HIDE1A8MVS5 230 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 URODP06132 367 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 TMEM191BP0C7N4 346 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 DLATP10515 647 aaKnown RBP15.53■□□□□ 0.08
LIG1-208ENST00000595758 CCNE1P24864 410 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 GLUD2P49448 558 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 CASP4P49662 377 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 C9orf57Q5W0N0 161 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 NELFBQ8WX92 580 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 AUTS2Q8WXX7 1259 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 TLE6Q9H808 572 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 MRPL17Q9NRX2 175 aaKnown RBP15.53■□□□□ 0.08
LIG1-208ENST00000595758 CHST7Q9NS84 486 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 INTS13Q9NVM9 706 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 SSX2IPQ9Y2D8 614 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
LIG1-208ENST00000595758 PDCD11Q14690 1871 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 ANO9A1A5B4 782 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 I3L4J1 428 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 PIRO00625 290 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 C2CD2LO14523 706 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 CETN3O15182 167 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 MAPK13O15264 365 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 AKAP3O75969 853 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 TNNC2P02585 160 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 TNNI1P19237 187 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 PSMC2P35998 433 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 BRCC3P46736 316 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 PMS1P54277 932 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 DSG1Q02413 1049 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 LRRC63Q05C16 580 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 SKIV2LQ15477 1246 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 PTPN14Q15678 1187 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 KIAA0319Q5VV43 1072 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 LMBRD2Q68DH5 695 aaPredicted RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 ADGRD2Q7Z7M1 963 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 RBM23Q86U06 439 aaKnown RBP15.52■□□□□ 0.08
LIG1-208ENST00000595758 CEP57Q86XR8 500 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 WDR49Q8IV35 697 aa15.52■□□□□ 0.08
LIG1-208ENST00000595758 RIN2Q8WYP3 895 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms