RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TNFRSF10AO00220 468 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 PODXLO00592 558 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 SRGAP2BP0DMP2 458 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 FGFR3P22607 806 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 KLRC2P26717 231 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 GUCY2FP51841 1108 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 WNT7BP56706 349 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 NUCB2P80303 420 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 ZP2Q05996 745 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 PPP2R3AQ06190 1150 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 KYAT1Q16773 422 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 FAM26FQ5R3K3 315 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 UNC13DQ70J99 1090 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 RIN2Q8WYP3 895 aaPredicted RBP11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 PIK3R5Q8WYR1 880 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 PAGE5Q96GU1 130 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 CBWD1Q9BRT8 395 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 TTPALQ9BTX7 342 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 RPF1Q9H9Y2 349 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 SSX2IPQ9Y2D8 614 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
SHKBP1-206ENST00000595523 C19orf67A6NJJ6 358 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 PPEF2O14830 753 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 ADAM12O43184 909 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 ADH1AP07327 375 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 NFICP08651 508 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 HOXB8P17481 243 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 TKTP29401 623 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 LRPAP1P30533 357 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 JADE1Q6IE81 842 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 KIAA1841Q6NSI8 718 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 RSPO2Q6UXX9 243 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 PPFIBP1Q86W92 1011 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 CEP57Q86XR8 500 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 GLYCTKQ8IVS8 523 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 ADHFE1Q8IWW8 467 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 CEP57L1Q8IYX8 460 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 C12orf76Q8N812 135 aaPredicted RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 SCFD1Q8WVM8 642 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 POMGNT1Q8WZA1 660 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 SAAL1Q96ER3 474 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 DDX27Q96GQ7 796 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 FBXL18Q96ME1 805 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 CLSTN3Q9BQT9 956 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 PYM1Q9BRP8 204 aaKnown RBP11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 FNIP2Q9P278 1114 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 PRKAG3Q9UGI9 489 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 EXOC7Q9UPT5 735 aa11.95□□□□□ -0.5
SHKBP1-206ENST00000595523 PVALEFA0A1B0GWK0 134 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 EIF3DO15371 548 aaKnown RBP eCLIP11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 CYP3A5P20815 502 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 GARTP22102 1010 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 RPL9P32969 192 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 SYKP43405 635 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 ELAVL2Q12926 359 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 PSMD5Q16401 504 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 RARS2Q5T160 578 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 SPATA1Q5VX52 437 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 LILRA6Q6PI73 481 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 PALB2Q86YC2 1186 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 SYCP3Q8IZU3 236 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 FSIP1Q8NA03 581 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 TMEM87AQ8NBN3 555 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 ZNF507Q8TCN5 953 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 FAM213AQ9BRX8 229 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 ADAM7Q9H2U9 754 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 TMEM206Q9H813 350 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 MAN1C1Q9NR34 630 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 DZANK1Q9NVP4 752 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 USP25Q9UHP3 1055 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 UBQLN1Q9UMX0 589 aaKnown RBP11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 FAM50BQ9Y247 325 aa11.94□□□□□ -0.5
SHKBP1-206ENST00000595523 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 GOLGA8JA6NMD2 632 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 TGFB1I1O43294 461 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 TGM5O43548 720 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 GLUD1P00367 558 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 SPATA31D3P0C874 917 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 AARSP49588 968 aaKnown RBP eCLIP11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 CBX2Q14781 532 aaPredicted RBP11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 POSTNQ15063 836 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 BMT2Q1RMZ1 405 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 SPATA31D4Q6ZUB0 917 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 BRSK2Q8IWQ3 736 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 CD302Q8IX05 232 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 GJD3Q8N144 294 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 KIAA0895Q8NCT3 520 aa11.93□□□□□ -0.5
SHKBP1-206ENST00000595523 FAM84AQ96KN4 292 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms