RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 RPL17P18621 184 aaKnown RBP16.7■□□□□ 0.26
USE1-206ENST00000595101 KCNC3Q14003 757 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 KYAT1Q16773 422 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 FAM171A1Q5VUB5 890 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 DCLRE1AQ6PJP8 1040 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
USE1-206ENST00000595101 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
USE1-206ENST00000595101 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 EXTL3O43909 919 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 CYP2J2P51589 502 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 DSG1Q02413 1049 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 PSMD2Q13200 908 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 LMBRD2Q68DH5 695 aaPredicted RBP16.69■□□□□ 0.26
USE1-206ENST00000595101 GLYCTKQ8IVS8 523 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.69■□□□□ 0.26
USE1-206ENST00000595101 KCTD10Q9H3F6 313 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 MRPL17Q9NRX2 175 aaKnown RBP16.69■□□□□ 0.26
USE1-206ENST00000595101 COG5Q9UP83 839 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 PCDHA5Q9Y5H7 936 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 GLUD2P49448 558 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 ISM2Q6H9L7 571 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 KANK3Q6NY19 840 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 GPD1LQ8N335 351 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 RIN2Q8WYP3 895 aaPredicted RBP16.69■□□□□ 0.26
USE1-206ENST00000595101 UROC1Q96N76 676 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 KLHL5Q96PQ7 755 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 ASB2Q96Q27 587 aa16.69■□□□□ 0.26
USE1-206ENST00000595101 RBAKQ9NYW8 714 aaPredicted RBP16.69■□□□□ 0.26
USE1-206ENST00000595101 UBQLN1Q9UMX0 589 aaKnown RBP16.69■□□□□ 0.26
USE1-206ENST00000595101 SF3B1O75533 1304 aaKnown RBP eCLIP16.69■□□□□ 0.26
USE1-206ENST00000595101 TMEM189-UBE2V1I3L0A0 370 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 TEX28O15482 410 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 URODP06132 367 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 EPCAMP16422 314 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
USE1-206ENST00000595101 NDUFV1P49821 464 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 KCNB1Q14721 858 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 TMEM132DQ14C87 1099 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 KIAA1841Q6NSI8 718 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 BRSK2Q8IWQ3 736 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 ATXN2LQ8WWM7 1075 aaKnown RBP16.68■□□□□ 0.26
USE1-206ENST00000595101 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 TIGD1Q96MW7 591 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 APOL5Q9BWW9 433 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 ASB7Q9H672 318 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
USE1-206ENST00000595101 ADAM12O43184 909 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
USE1-206ENST00000595101 LRPAP1P30533 357 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 UBE2HP62256 183 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
USE1-206ENST00000595101 SPATA20Q8TB22 786 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 LNX1Q8TBB1 728 aaPredicted RBP16.67■□□□□ 0.26
USE1-206ENST00000595101 DDX27Q96GQ7 796 aaKnown RBP16.67■□□□□ 0.26
USE1-206ENST00000595101 MSLNLQ96KJ4 702 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 TTPALQ9BTX7 342 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 UBE4BO95155 1302 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 PTPRJQ12913 1337 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 CITO14578 2027 aa16.67■□□□□ 0.26
USE1-206ENST00000595101 SPTLC1O15269 473 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 SPATA31D3P0C874 917 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 RSPO2Q6UXX9 243 aaPredicted RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 SPATA31D4Q6ZUB0 917 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 CD302Q8IX05 232 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 POP1Q99575 1024 aaKnown RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 BMP1P13497 986 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 CYP3A5P20815 502 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 FGFR3P22607 806 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 KLRC2P26717 231 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 CLCN4P51793 760 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 TFAMQ00059 246 aaKnown RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 BMS1Q14692 1282 aaKnown RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 CAMK4Q16566 473 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 CLEC17AQ6ZS10 378 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 C12orf76Q8N812 135 aaPredicted RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 SLC22A17Q8WUG5 538 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 CLSTN3Q9BQT9 956 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 C2CD2Q9Y426 696 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 NUB1Q9Y5A7 615 aa16.66■□□□□ 0.26
USE1-206ENST00000595101 TIMM13Q9Y5L4 95 aaPredicted RBP16.66■□□□□ 0.26
USE1-206ENST00000595101 ZNF233A6NK53 670 aa16.65■□□□□ 0.26
USE1-206ENST00000595101 NCK2O43639 380 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms