RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 PDK3Q15120 406 aa12.99□□□□□ -0.33
LIG1-207ENST00000594759 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
LIG1-207ENST00000594759 TUBGCP5Q96RT8 1024 aa12.99□□□□□ -0.33
LIG1-207ENST00000594759 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
LIG1-207ENST00000594759 EPB41L4AQ9HCS5 686 aaPredicted RBP12.99□□□□□ -0.33
LIG1-207ENST00000594759 DNAJC12Q9UKB3 198 aa12.99□□□□□ -0.33
LIG1-207ENST00000594759 MINPP1Q9UNW1 487 aa12.99□□□□□ -0.33
LIG1-207ENST00000594759 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
LIG1-207ENST00000594759 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 POTEMA6NI47 508 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 KLRF2D3W0D1 207 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 H0YGN5 161 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 ADCY6O43306 1168 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 SLC9A1P19634 815 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 GPC5P78333 572 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 BFSP1Q12934 665 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 PRPF39Q86UA1 669 aaKnown RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 SIX5Q8N196 739 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 OR6Y1Q8NGX8 325 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 CCDC138Q96M89 665 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 PLGRKTQ9HBL7 147 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 PTTG2Q9NZH5 202 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 NFS1Q9Y697 457 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 COPEO14579 308 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 MAN1A2O60476 641 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 GH1P01241 217 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 DYNLL2Q96FJ2 89 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 NACA2Q9H009 215 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 DKK3Q9UBP4 350 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 GPR75-ASB3A0A0A6YYF3 556 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 IQANK1A0A1B0GTG1 560 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 IPO5O00410 1097 aaKnown RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 NFKBIAP25963 317 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 YARSP54577 528 aaKnown RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 KIF22Q14807 665 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 SFR1Q86XK3 245 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 ZBED8Q8IZ13 594 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 ATP2A3Q93084 1043 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 KLF6Q99612 283 aaPredicted RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 DCUN1D5Q9BTE7 237 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 MARCOQ9UEW3 520 aaPredicted RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 ASB3Q9Y575 518 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 MAGEA10P43363 369 aaPredicted RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 RASA2Q15283 850 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 OASLQ15646 514 aaKnown RBP12.98□□□□□ -0.33
LIG1-207ENST00000594759 BBS9Q3SYG4 887 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 PRR16Q569H4 304 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 DSTYKQ6XUX3 929 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 GCNAQ96QF7 691 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 STK33Q9BYT3 514 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 WNT8AQ9H1J5 351 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 SIK3Q9Y2K2 1263 aa12.98□□□□□ -0.33
LIG1-207ENST00000594759 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 UMODL1Q5DID0 1318 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 EIF4BP23588 611 aaKnown RBP12.97□□□□□ -0.33
LIG1-207ENST00000594759 HDAC4P56524 1084 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 LIN9Q5TKA1 542 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 DUPD1Q68J44 220 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 NSMFQ6X4W1 530 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 TSNARE1Q96NA8 513 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 CCDC134Q9H6E4 229 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 CCPG1Q9ULG6 757 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 SGK1O00141 431 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 MATN2O00339 956 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 KIAA0391O15091 583 aaKnown RBP12.97□□□□□ -0.33
LIG1-207ENST00000594759 GSC2O15499 205 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 TBX10O75333 385 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 BTDP43251 543 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 MAGEA4P43358 317 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 CCNG1P51959 295 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 CENPPQ6IPU0 288 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 EYA3Q99504 573 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 OSGEPQ9NPF4 335 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 GINM1Q9NU53 330 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 KBTBD4Q9NVX7 518 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 AK5Q9Y6K8 562 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 DLG5Q8TDM6 1919 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 MYMKA6NI61 221 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 XPOTO43592 962 aaKnown RBP12.97□□□□□ -0.33
LIG1-207ENST00000594759 KRT38O76015 456 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 MYL2P10916 166 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 KRT4P19013 534 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 C21orf59P57076 290 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 HPCAP84074 193 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 MECOMQ03112 1051 aa12.97□□□□□ -0.33
LIG1-207ENST00000594759 ZNF571Q7Z3V5 609 aaPredicted RBP12.97□□□□□ -0.33
LIG1-207ENST00000594759 ARMCX1Q9P291 453 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms