RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 ALADP13716 330 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 RPL9P32969 192 aaKnown RBP16.07■□□□□ 0.16
USE1-205ENST00000594724 ACOT2P49753 483 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 CREMQ03060 361 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 PPP2R3AQ06190 1150 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 KYAT1Q16773 422 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 ADALQ6DHV7 355 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 IQUBQ8NA54 791 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 NECTIN4Q96NY8 510 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 ACCSQ96QU6 501 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 TNMDQ9H2S6 317 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 C11orf16Q9NQ32 467 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 KBTBD4Q9NVX7 518 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 CPSF3Q9UKF6 684 aaKnown RBP16.07■□□□□ 0.16
USE1-205ENST00000594724 PLXNA3P51805 1871 aa16.07■□□□□ 0.16
USE1-205ENST00000594724 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.06■□□□□ 0.16
USE1-205ENST00000594724 ADSSP30520 456 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 GUCY2FP51841 1108 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 L1TD1Q5T7N2 865 aaKnown RBP16.06■□□□□ 0.16
USE1-205ENST00000594724 RESP18Q5W5W9 173 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 SLFN12LQ6IEE8 588 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 RSPO2Q6UXX9 243 aaPredicted RBP16.06■□□□□ 0.16
USE1-205ENST00000594724 CCDC65Q8IXS2 484 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 KREMEN2Q8NCW0 462 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 HVCN1Q96D96 273 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 PLEKHA4Q9H4M7 779 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 OLFML3Q9NRN5 406 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 FAM13BQ9NYF5 915 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 AGO2Q9UKV8 859 aaKnown RBP16.06■□□□□ 0.16
USE1-205ENST00000594724 NUB1Q9Y5A7 615 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 PCDHB13Q9Y5F0 798 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 STYXL1Q9Y6J8 313 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 CITO14578 2027 aa16.06■□□□□ 0.16
USE1-205ENST00000594724 C2CD4DB7Z1M9 353 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 PRPF6O94906 941 aaKnown RBP16.05■□□□□ 0.16
USE1-205ENST00000594724 ADRB2P07550 413 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 CASP1P29466 404 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 OR1D2P34982 312 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 AMPD3Q01432 767 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 JADE1Q6IE81 842 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 PDXDC1Q6P996 788 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 ELMSAN1Q6PJG2 1045 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 ZSWIM2Q8NEG5 633 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 CMASQ8NFW8 434 aaPredicted RBP16.05■□□□□ 0.16
USE1-205ENST00000594724 POMGNT1Q8WZA1 660 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 LRFN3Q9BTN0 628 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 TRIM9Q9C026 710 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 UBQLN1Q9UMX0 589 aaKnown RBP16.05■□□□□ 0.16
USE1-205ENST00000594724 NR2E1Q9Y466 385 aa16.05■□□□□ 0.16
USE1-205ENST00000594724 C1RP00736 705 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 MCM4P33991 863 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 ASIC1P78348 528 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 TMEM31Q5JXX7 168 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
USE1-205ENST00000594724 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 SYCP3Q8IZU3 236 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 LEO1Q8WVC0 666 aaPredicted RBP16.04■□□□□ 0.16
USE1-205ENST00000594724 ZNF707Q96C28 371 aaPredicted RBP16.04■□□□□ 0.16
USE1-205ENST00000594724 MTRRQ9UBK8 725 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 EXOC7Q9UPT5 735 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 CDY1Q9Y6F8 540 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 VWA8A3KMH1 1905 aa16.04■□□□□ 0.16
USE1-205ENST00000594724 TULP1O00294 542 aaPredicted RBP16.03■□□□□ 0.16
USE1-205ENST00000594724 GPR37L1O60883 481 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 NFICP08651 508 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 CYP3A5P20815 502 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 LRPAP1P30533 357 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 AFMP43652 599 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 KRT85P78386 507 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 RAB33AQ14088 237 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 POSTNQ15063 836 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
USE1-205ENST00000594724 ANKS3Q6ZW76 656 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 CD302Q8IX05 232 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 SMG7Q92540 1137 aaKnown RBP16.03■□□□□ 0.16
USE1-205ENST00000594724 SUSD3Q96L08 255 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 SERTAD1Q9UHV2 236 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 FBXW11Q9UKB1 542 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 BACE2Q9Y5Z0 518 aa16.03■□□□□ 0.16
USE1-205ENST00000594724 PPEF2O14830 753 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 SYN3O14994 580 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 XPOTO43592 962 aaKnown RBP16.02■□□□□ 0.16
USE1-205ENST00000594724 ZMYND10O75800 440 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 ARPP19P56211 112 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 ALCAMQ13740 583 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 BECN1Q14457 450 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 TMEM132DQ14C87 1099 aa16.02■□□□□ 0.16
USE1-205ENST00000594724 SPATA1Q5VX52 437 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms