RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GJB7Q6PEY0 223 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 IRF2BP2Q7Z5L9 587 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 GPRC5AQ8NFJ5 357 aa16.45■□□□□ 0.22
PNKP-204ENST00000594661 GOLGA6L10A6NI86 522 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 VIMP08670 466 aaKnown RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 CARSP49589 748 aaKnown RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 FKBP1BP68106 108 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 CUL3Q13618 768 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 IFI16Q16666 785 aaKnown RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 TMEM63BQ5T3F8 832 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 SLC39A4Q6P5W5 647 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 MORC4Q8TE76 937 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 NIFKQ9BYG3 293 aaKnown RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 DHX33Q9H6R0 707 aaKnown RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 FBXL5Q9UKA1 691 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 NFU1Q9UMS0 254 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 EXOC7Q9UPT5 735 aa16.44■□□□□ 0.22
PNKP-204ENST00000594661 BZW2Q9Y6E2 419 aaKnown RBP16.44■□□□□ 0.22
PNKP-204ENST00000594661 DPPA5A6NC42 116 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 GOLGA8IPA6NC78 632 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 GOLGA8JA6NMD2 632 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 STAT5BP51692 787 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
PNKP-204ENST00000594661 ITIH4Q14624 930 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
PNKP-204ENST00000594661 HSDL1Q3SXM5 330 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ANKRD20A2Q5SQ80 823 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ANKRD20A1Q5TYW2 823 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ANKRD20A3Q5VUR7 823 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 NUGGCQ68CJ6 796 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
PNKP-204ENST00000594661 CCDC197Q8NCU1 140 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PLEKHO2Q8TD55 490 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 SEPT1Q8WYJ6 367 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 WDR35Q9P2L0 1181 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 BLOC1S6Q9UL45 172 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PLAAQ9Y263 795 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 SLC45A1Q9Y2W3 748 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ADRB2P07550 413 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 KRT13P13646 458 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PPP2R2AP63151 447 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 MRPS25P82663 173 aaKnown RBP16.43■□□□□ 0.22
PNKP-204ENST00000594661 MYL7Q01449 175 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 NAB2Q15742 525 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 SGSM1Q2NKQ1 1148 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PPP1R15BQ5SWA1 713 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 CELF3Q5SZQ8 465 aaKnown RBP16.43■□□□□ 0.22
PNKP-204ENST00000594661 NFRKBQ6P4R8 1299 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 INTS8Q75QN2 995 aaKnown RBP16.43■□□□□ 0.22
PNKP-204ENST00000594661 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ASAP3Q8TDY4 903 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 TEKT4Q8WW24 435 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 COPS5Q92905 334 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 IFT74Q96LB3 600 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PSMB7Q99436 277 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 GPR20Q99678 358 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PACSIN1Q9BY11 444 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 ARHGAP28Q9P2N2 729 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
PNKP-204ENST00000594661 PLXNB2O15031 1838 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 LRRD1A4D1F6 860 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 NCK2O43639 380 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 KIF4AO95239 1232 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 MYZAPP0CAP1 466 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 KLRC1P26715 233 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 ALDH3A1P30838 453 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 VAMP7P51809 220 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 JAM2P57087 298 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 TARBP2Q15633 366 aaKnown RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 LRRC23Q53EV4 343 aaPredicted RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 C1orf220Q5T0J3 134 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 AGBL2Q5U5Z8 902 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 FAM160B1Q5W0V3 765 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 CCDC62Q6P9F0 684 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 CPLX4Q7Z7G2 160 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.42■□□□□ 0.22
PNKP-204ENST00000594661 GLI1P08151 1106 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 NQO1P15559 274 aaKnown RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 CXCR5P32302 372 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 CCNA1P78396 465 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 MRPS35P82673 323 aaKnown RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 PPP3CAQ08209 521 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 TBC1D1Q86TI0 1168 aaPredicted RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
PNKP-204ENST00000594661 NAF1Q96HR8 494 aaKnown RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
PNKP-204ENST00000594661 EMSYQ7Z589 1322 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 H0YGN5 161 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 PALMO75781 387 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 GLRA2P23416 452 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 MARK3P27448 753 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 TMOD1P28289 359 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms