RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 NFICP08651 508 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 CNPP09543 421 aaKnown RBP15.82■□□□□ 0.12
VRK3-206ENST00000594090 RPL9P32969 192 aaKnown RBP15.82■□□□□ 0.12
VRK3-206ENST00000594090 STK4Q13043 487 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 FAM171A1Q5VUB5 890 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 KIAA1841Q6NSI8 718 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 CD300LGQ6UXG3 332 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 TMEM184AQ6ZMB5 413 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 GPR65Q8IYL9 337 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 TMEM130Q8N3G9 435 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 CCDC47Q96A33 483 aaKnown RBP15.82■□□□□ 0.12
VRK3-206ENST00000594090 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 MSLNLQ96KJ4 702 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 PCIF1Q9H4Z3 704 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 ASB7Q9H672 318 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 CLEC1BQ9P126 229 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 DERAQ9Y315 318 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 HCFC2Q9Y5Z7 792 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 VWA8A3KMH1 1905 aa15.82■□□□□ 0.12
VRK3-206ENST00000594090 EXTL3O43909 919 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 RHOBTB3O94955 611 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 IL18RAPO95256 599 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 SRGAP2BP0DMP2 458 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 CYP3A5P20815 502 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 LRPAP1P30533 357 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 TMEM132DQ14C87 1099 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 RTP2Q5QGT7 225 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 SPATA1Q5VX52 437 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.81■□□□□ 0.12
VRK3-206ENST00000594090 BRSK2Q8IWQ3 736 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 GPD1LQ8N335 351 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.81■□□□□ 0.12
VRK3-206ENST00000594090 RIN2Q8WYP3 895 aaPredicted RBP15.81■□□□□ 0.12
VRK3-206ENST00000594090 CASP10Q92851 521 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 KLHL5Q96PQ7 755 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 RXFP1Q9HBX9 757 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 AGPAT3Q9NRZ7 376 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 RBAKQ9NYW8 714 aaPredicted RBP15.81■□□□□ 0.12
VRK3-206ENST00000594090 C2CD2Q9Y426 696 aa15.81■□□□□ 0.12
VRK3-206ENST00000594090 GOLGA8IPA6NC78 632 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 GOLGA8JA6NMD2 632 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 I3L4J1 428 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 GADD45BO75293 160 aaPredicted RBP15.8■□□□□ 0.12
VRK3-206ENST00000594090 BRCC3P46736 316 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 WNT7BP56706 349 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 SNRPFP62306 86 aaKnown RBP15.8■□□□□ 0.12
VRK3-206ENST00000594090 PNOCQ13519 176 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 KCNB1Q14721 858 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 CLUL1Q15846 466 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 KNOP1Q1ED39 458 aaKnown RBP15.8■□□□□ 0.12
VRK3-206ENST00000594090 PRSS55Q6UWB4 352 aaPredicted RBP15.8■□□□□ 0.12
VRK3-206ENST00000594090 HS2ST1Q7LGA3 356 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 PPFIBP1Q86W92 1011 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 CEP57Q86XR8 500 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 BEST2Q8NFU1 509 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 NOC3LQ8WTT2 800 aaKnown RBP15.8■□□□□ 0.12
VRK3-206ENST00000594090 SLC22A17Q8WUG5 538 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 TIGD1Q96MW7 591 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 TTPALQ9BTX7 342 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.8■□□□□ 0.12
VRK3-206ENST00000594090 HSPBP1Q9NZL4 362 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 CD207Q9UJ71 328 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 PLXNA3P51805 1871 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 VCANP13611 3396 aa15.8■□□□□ 0.12
VRK3-206ENST00000594090 BRWD1Q9NSI6 2320 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 CLIC2O15247 247 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 TEX28O15482 410 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 TRAPPC3O43617 180 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 ADH1AP07327 375 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 BMP1P13497 986 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 FGFR3P22607 806 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 KLRC2P26717 231 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 TKTP29401 623 aaKnown RBP15.79■□□□□ 0.12
VRK3-206ENST00000594090 CLCN4P51793 760 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 CREMQ03060 361 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 PUS10Q3MIT2 529 aaKnown RBP15.79■□□□□ 0.12
VRK3-206ENST00000594090 PTCRAQ6ISU1 281 aaPredicted RBP15.79■□□□□ 0.12
VRK3-206ENST00000594090 EFCAB13Q8IY85 973 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 SMRP1Q8NCR6 262 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 PIK3R5Q8WYR1 880 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 FNIP2Q9P278 1114 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 CGNQ9P2M7 1197 aaKnown RBP15.79■□□□□ 0.12
VRK3-206ENST00000594090 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
VRK3-206ENST00000594090 GRXCR2A6NFK2 248 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 MBTPS2O43462 519 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 EPCAMP16422 314 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 MCM4P33991 863 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 SMAD4Q13485 552 aaKnown RBP15.78■□□□□ 0.12
VRK3-206ENST00000594090 PSMD5Q16401 504 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 ANKRD54Q6NXT1 300 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 C12orf56Q8IXR9 622 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
VRK3-206ENST00000594090 FBXL18Q96ME1 805 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 KIAA1586Q9HCI6 787 aa15.78■□□□□ 0.12
VRK3-206ENST00000594090 PPEF2O14830 753 aa15.77■□□□□ 0.12
VRK3-206ENST00000594090 IL9P15248 144 aa15.77■□□□□ 0.12
VRK3-206ENST00000594090 HOXB8P17481 243 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms