RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 TRIM6Q9C030 488 aaPredicted RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 TRPV6Q9H1D0 765 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 OGDHLQ9ULD0 1010 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 HES2Q9Y543 173 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 NFICP08651 508 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 TMEM191BP0C7N4 346 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 HSPA8P11142 646 aaKnown RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 H2AFXP16104 143 aaPredicted RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 KRT83P78385 493 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 ASIC2Q16515 512 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 DUOXA2Q1HG44 320 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 TDRD12Q587J7 1177 aaKnown RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 SCARA3Q6AZY7 606 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 TRAPPC11Q7Z392 1133 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 NT5C1BQ96P26 610 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 OSBPL7Q9BZF2 842 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 EPC1Q9H2F5 836 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 NXF3Q9H4D5 531 aaKnown RBP14.23□□□□□ -0.13
VRK3-205ENST00000593919 SNTG2Q9NY99 539 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 MYO1AQ9UBC5 1043 aa14.23□□□□□ -0.13
VRK3-205ENST00000593919 ARVCFO00192 962 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 PHACTR2O75167 634 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 SERPING1P05155 500 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 NCOA4Q13772 614 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 CCDC122Q5T0U0 273 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 JADE1Q6IE81 842 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 IRF2BP2Q7Z5L9 587 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 CTU1Q7Z7A3 348 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 HELQQ8TDG4 1101 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 TATDN2Q93075 761 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 JAKMIP2Q96AA8 810 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 CCDC42Q96M95 316 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 KREMEN1Q96MU8 473 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 ASB7Q9H672 318 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 HAUS4Q9H6D7 363 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 AGO3Q9H9G7 860 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 PUF60Q9UHX1 559 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 CDC23Q9UJX2 597 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 ST3GAL5Q9UNP4 418 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 EIF3CLB5ME19 914 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
VRK3-205ENST00000593919 GFPT2O94808 682 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 SOX5P35711 763 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 EIF4A3P38919 411 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 STAT1P42224 750 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 CLCN6P51797 869 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 KLHL30Q0D2K2 578 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 NFX1Q12986 1120 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 UBXN11Q5T124 520 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 ZNF618Q5T7W0 954 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 TWF2Q6IBS0 349 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 SPOPLQ6IQ16 392 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 GOLGA1Q92805 767 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 ANKRD36BP1Q96IX9 119 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 EIF3CQ99613 913 aaKnown RBP14.22□□□□□ -0.13
VRK3-205ENST00000593919 DEF6Q9H4E7 631 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 C1orf112Q9NSG2 853 aa14.22□□□□□ -0.13
VRK3-205ENST00000593919 SCN1AP35498 2009 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 SSU72P8A0A1W2PR75 194 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 FOXN3O00409 490 aaPredicted RBP14.21□□□□□ -0.13
VRK3-205ENST00000593919 EVI5O60447 810 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 CST3P01034 146 aaPredicted RBP14.21□□□□□ -0.13
VRK3-205ENST00000593919 GHRP10912 638 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 MFAP3P55082 362 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
VRK3-205ENST00000593919 WDR44Q5JSH3 913 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 FBXO47Q5MNV8 452 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 RSRC2Q7L4I2 434 aaKnown RBP14.21□□□□□ -0.13
VRK3-205ENST00000593919 ZNF333Q96JL9 665 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 ZNF446Q9NWS9 450 aa14.21□□□□□ -0.13
VRK3-205ENST00000593919 RCCD1A6NED2 376 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 RECQL4O94761 1208 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 TNNC2P02585 160 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 CKBP12277 381 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 PRKCIP41743 596 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 CDK7P50613 346 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 KIF11P52732 1056 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 LBX1P52954 281 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 NOP14P78316 857 aaKnown RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 TMEM132DQ14C87 1099 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 ASTE1Q2TB18 679 aaPredicted RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 FAM26DQ5JW98 314 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 FBXO46Q6PJ61 603 aaPredicted RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 TMEM130Q8N3G9 435 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 C1orf127Q8N9H9 656 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 SNX27Q96L92 541 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 APOL6Q9BWW8 343 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 CXCL16Q9H2A7 254 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 APOBEC3GQ9HC16 384 aaKnown RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
VRK3-205ENST00000593919 OGFRQ9NZT2 677 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 IPPQ9Y573 584 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 GPR182O15218 404 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 KRT86O43790 486 aa14.2□□□□□ -0.14
VRK3-205ENST00000593919 CAND2O75155 1236 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms