RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 HYIQ5T013 277 aa26.18■■□□□ 1.78
LSM4-202ENST00000593564 KCTD17Q8N5Z5 321 aa26.18■■□□□ 1.78
LSM4-202ENST00000593564 FOXQ1Q9C009 403 aa26.18■■□□□ 1.78
LSM4-202ENST00000593564 KCNG1Q9UIX4 513 aa26.18■■□□□ 1.78
LSM4-202ENST00000593564 NOTCH4Q99466 2003 aa26.17■■□□□ 1.78
LSM4-202ENST00000593564 ABLIM3O94929 683 aa26.17■■□□□ 1.78
LSM4-202ENST00000593564 RHOP08100 348 aa26.17■■□□□ 1.78
LSM4-202ENST00000593564 RILPL1Q5EBL4 403 aa26.17■■□□□ 1.78
LSM4-202ENST00000593564 DDX23Q9BUQ8 820 aaKnown RBP26.17■■□□□ 1.78
LSM4-202ENST00000593564 MRPS23Q9Y3D9 190 aaKnown RBP26.17■■□□□ 1.78
LSM4-202ENST00000593564 WDR87Q6ZQQ6 2873 aa26.17■■□□□ 1.78
LSM4-202ENST00000593564 MYH15Q9Y2K3 1946 aa26.17■■□□□ 1.78
LSM4-202ENST00000593564 WDR27A2RRH5 827 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 SFI1A8K8P3 1242 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 MEFVO15553 781 aaPredicted RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 TOM1L1O75674 476 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 ATP2C1P98194 919 aaPredicted RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 PFKPQ01813 784 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 PRKCQQ04759 706 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 STRN3Q13033 797 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 SNW1Q13573 536 aaKnown RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 MRPL58Q14197 206 aaKnown RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 MLF2Q15773 248 aaPredicted RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 C8orf34Q49A92 452 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 TMEM161BQ8NDZ6 487 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 ING5Q8WYH8 240 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 C18orf25Q96B23 403 aaPredicted RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 ZBTB45Q96K62 511 aaPredicted RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 KXD1Q9BQD3 176 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 GDE1Q9NZC3 331 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 NUB1Q9Y5A7 615 aa26.16■■□□□ 1.78
LSM4-202ENST00000593564 EP300Q09472 2414 aaPredicted RBP26.16■■□□□ 1.78
LSM4-202ENST00000593564 KANSL1LA0AUZ9 987 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 H7C4K7 107 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 LRG1P02750 347 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 HARSP12081 509 aaKnown RBP26.15■■□□□ 1.78
LSM4-202ENST00000593564 PLS3P13797 630 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 GLULP15104 373 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 ATF2P15336 505 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 ELF1P32519 619 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 NOLC1Q14978 699 aaKnown RBP eCLIP26.15■■□□□ 1.78
LSM4-202ENST00000593564 ZRSR1Q15695 479 aaKnown RBP26.15■■□□□ 1.78
LSM4-202ENST00000593564 SLC5A9Q2M3M2 681 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 SLC44A4Q53GD3 710 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 MCTP1Q6DN14 999 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 C1orf210Q8IVY1 113 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 SYT2Q8N9I0 419 aaPredicted RBP26.15■■□□□ 1.78
LSM4-202ENST00000593564 PNMA5Q96PV4 448 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 KCND2Q9NZV8 630 aa26.15■■□□□ 1.78
LSM4-202ENST00000593564 PRRG1O14668 218 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 ECI2O75521 394 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 MAPTP10636 758 aaKnown RBP26.14■■□□□ 1.78
LSM4-202ENST00000593564 PTPN2P17706 415 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 SMTNP53814 917 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 ZPBP2Q6X784 338 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 TCEAL8Q8IYN2 117 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 SUSD3Q96L08 255 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 ANKFY1Q9P2R3 1169 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 FBXL5Q9UKA1 691 aa26.14■■□□□ 1.78
LSM4-202ENST00000593564 ZNF292O60281 2723 aa26.14■■□□□ 1.77
LSM4-202ENST00000593564 LMNAP02545 664 aaKnown RBP26.13■■□□□ 1.77
LSM4-202ENST00000593564 SP9P0CG40 484 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 RAD51AP2Q09MP3 1159 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 RABEP1Q15276 862 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 SLC10A6Q3KNW5 377 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 TPGS2Q68CL5 300 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 MCRS1Q96EZ8 462 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 OSBPL6Q9BZF3 934 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 R4GN57 208 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 CITO14578 2027 aa26.13■■□□□ 1.77
LSM4-202ENST00000593564 LRRN2O75325 713 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 SLC12A3P55017 1021 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 ARPP19P56211 112 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 MCL1Q07820 350 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 CTXN3Q4LDR2 81 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 ZC3H14Q6PJT7 736 aaKnown RBP26.12■■□□□ 1.77
LSM4-202ENST00000593564 KCNG4Q8TDN1 519 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 CYP4F11Q9HBI6 524 aa26.12■■□□□ 1.77
LSM4-202ENST00000593564 CLDN3O15551 220 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 PLA2G4BP0C869 781 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 CEBPBP17676 345 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 MCM4P33991 863 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 SEZ6Q53EL9 994 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 PRSS36Q5K4E3 855 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 ARL6IP4Q66PJ3 421 aaKnown RBP26.11■■□□□ 1.77
LSM4-202ENST00000593564 ZNF280DQ6N043 979 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 APPL2Q8NEU8 664 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 CDK5RAP3Q96JB5 506 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 TBC1D32Q96NH3 1257 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 BCO2Q9BYV7 579 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 PLEKHA5Q9HAU0 1116 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 TUBGCP4Q9UGJ1 667 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 MAFFQ9ULX9 164 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 INSL5Q9Y5Q6 135 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 CACNA1IQ9P0X4 2223 aa26.11■■□□□ 1.77
LSM4-202ENST00000593564 VWA3AA6NCI4 1184 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 H0YCG3 227 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 MICAL2O94851 1124 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 SEC24AO95486 1093 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 FOXK2Q01167 660 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms