RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TBC1D4O60343 1298 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 ECI2O75521 394 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 ABLIM3O94929 683 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 LRG1P02750 347 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 PROZP22891 400 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 CDC25AP30304 524 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 ARPP19P56211 112 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 PFKPQ01813 784 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 DMP1Q13316 513 aaPredicted RBP17.92■□□□□ 0.46
LIG1-205ENST00000593425 PDIA5Q14554 519 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 PRSS36Q5K4E3 855 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 KCNK18Q7Z418 384 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 DCLK2Q8N568 766 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 C18orf25Q96B23 403 aaPredicted RBP17.92■□□□□ 0.46
LIG1-205ENST00000593425 RMDN1Q96DB5 314 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 BCO2Q9BYV7 579 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 KMT5AQ9NQR1 393 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 AVENQ9NQS1 362 aaPredicted RBP17.92■□□□□ 0.46
LIG1-205ENST00000593425 SLC38A7Q9NVC3 462 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 SPATA6Q9NWH7 488 aaPredicted RBP17.92■□□□□ 0.46
LIG1-205ENST00000593425 SPTBN4Q9H254 2564 aa17.92■□□□□ 0.46
LIG1-205ENST00000593425 MYH11P35749 1972 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 GVINP1Q7Z2Y8 2422 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 FAM170BA6NMN3 283 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 NRG2O14511 850 aaPredicted RBP17.91■□□□□ 0.46
LIG1-205ENST00000593425 SEC24AO95486 1093 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 MCF2P10911 925 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
LIG1-205ENST00000593425 KCNE1P15382 129 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 U2AF2P26368 475 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIG1-205ENST00000593425 TARSP26639 723 aaKnown RBP17.91■□□□□ 0.46
LIG1-205ENST00000593425 TANGO2Q6ICL3 276 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 RINT1Q6NUQ1 792 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 MPZL3Q6UWV2 235 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 TPRG1Q6ZUI0 275 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 C1orf186Q6ZWK4 172 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 TMEM130Q8N3G9 435 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 SUMF1Q8NBK3 374 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 TCEAL4Q96EI5 215 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 ZBTB45Q96K62 511 aaPredicted RBP17.91■□□□□ 0.46
LIG1-205ENST00000593425 ACAP3Q96P50 834 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 HINFPQ9BQA5 517 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 MMTAG2Q9BU76 263 aaKnown RBP17.91■□□□□ 0.46
LIG1-205ENST00000593425 OSBPL6Q9BZF3 934 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 GDE1Q9NZC3 331 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 CNTN3Q9P232 1028 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 DNM3Q9UQ16 869 aa17.91■□□□□ 0.46
LIG1-205ENST00000593425 SHISA7A6NL88 538 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 SFI1A8K8P3 1242 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 PRRG1O14668 218 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 SYN3O14994 580 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 SLC16A4O15374 487 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 LAMTOR5O43504 91 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 ATF2P15336 505 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 PTPN2P17706 415 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 FCARP24071 287 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 ELF1P32519 619 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 MRPL58Q14197 206 aaKnown RBP17.9■□□□□ 0.46
LIG1-205ENST00000593425 SEZ6Q53EL9 994 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 DRC1Q96MC2 740 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 CORO1BQ9BR76 489 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 TCHPQ9BT92 498 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 CYP4F11Q9HBI6 524 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 HEBP1Q9NRV9 189 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 FBXL5Q9UKA1 691 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 NUB1Q9Y5A7 615 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 INSL5Q9Y5Q6 135 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 STK24Q9Y6E0 443 aa17.9■□□□□ 0.46
LIG1-205ENST00000593425 KINO60870 393 aaKnown RBP17.89■□□□□ 0.45
LIG1-205ENST00000593425 CCR2P41597 374 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 ZNF528Q3MIS6 628 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 KRT79Q5XKE5 535 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 TCEAL8Q8IYN2 117 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 RUBCNQ92622 972 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 ELSPBP1Q96BH3 223 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 ZSCAN31Q96LW9 406 aaPredicted RBP17.89■□□□□ 0.45
LIG1-205ENST00000593425 KIF2CQ99661 725 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 TUBGCP4Q9UGJ1 667 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 FBXO4Q9UKT5 387 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 TICRRQ7Z2Z1 1910 aa17.89■□□□□ 0.45
LIG1-205ENST00000593425 H7C4K7 107 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
LIG1-205ENST00000593425 RPL9P32969 192 aaKnown RBP17.88■□□□□ 0.45
LIG1-205ENST00000593425 MCM4P33991 863 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 PRPHP41219 470 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 CSTF1Q05048 431 aaKnown RBP17.88■□□□□ 0.45
LIG1-205ENST00000593425 RAD51AP2Q09MP3 1159 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 GRM2Q14416 872 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 SLC10A6Q3KNW5 377 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 CTXN3Q4LDR2 81 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 ZBTB41Q5SVQ8 909 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 HS6ST3Q8IZP7 471 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 CLDN23Q96B33 292 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 SUSD3Q96L08 255 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.88■□□□□ 0.45
LIG1-205ENST00000593425 SH2B1Q9NRF2 756 aaPredicted RBP17.88■□□□□ 0.45
LIG1-205ENST00000593425 ANKFY1Q9P2R3 1169 aa17.88■□□□□ 0.45
LIG1-205ENST00000593425 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms