RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MYO9BQ13459 2157 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 CDH23Q9H251 3354 aa16.18■□□□□ 0.18
DDX39A-221ENST00000593026 TRIM49BA6NDI0 452 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 TMEM189-UBE2V1I3L0A0 370 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 POU3F3P20264 500 aaPredicted RBP16.17■□□□□ 0.18
DDX39A-221ENST00000593026 LRPAP1P30533 357 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 CASP4P49662 377 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 GUCY2FP51841 1108 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 PMS1P54277 932 aaKnown RBP16.17■□□□□ 0.18
DDX39A-221ENST00000593026 TFAMQ00059 246 aaKnown RBP16.17■□□□□ 0.18
DDX39A-221ENST00000593026 CAMK1Q14012 370 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 PSMD6Q15008 389 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 FUT10Q6P4F1 479 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 DCLRE1AQ6PJP8 1040 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 RBM43Q6ZSC3 357 aaKnown RBP16.17■□□□□ 0.18
DDX39A-221ENST00000593026 CACTINQ8WUQ7 758 aaKnown RBP16.17■□□□□ 0.18
DDX39A-221ENST00000593026 NELFBQ8WX92 580 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
DDX39A-221ENST00000593026 CCDC127Q96BQ5 260 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 MFSD14AQ96MC6 490 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
DDX39A-221ENST00000593026 SF3B1O75533 1304 aaKnown RBP eCLIP16.17■□□□□ 0.185e-11■■■■■ 51.7
DDX39A-221ENST00000593026 BICDL2A1A5D9 508 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 CETN3O15182 167 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 AKAP3O75969 853 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 TMEM191BP0C7N4 346 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 DLATP10515 647 aaKnown RBP16.16■□□□□ 0.18
DDX39A-221ENST00000593026 FKBP3Q00688 224 aaKnown RBP16.16■□□□□ 0.18
DDX39A-221ENST00000593026 PAK1Q13153 545 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
DDX39A-221ENST00000593026 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 PDE12Q6L8Q7 609 aaKnown RBP16.16■□□□□ 0.18
DDX39A-221ENST00000593026 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
DDX39A-221ENST00000593026 TMC7Q7Z402 723 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 WDR49Q8IV35 697 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 VPS52Q8N1B4 723 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 MLKLQ8NB16 471 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 MICAL1Q8TDZ2 1067 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 ANKRD36BP1Q96IX9 119 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 CGRRF1Q99675 332 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 TCF25Q9BQ70 676 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 VN1R3Q9BXE9 311 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 ENTPD7Q9NQZ7 604 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 DPP3Q9NY33 737 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 NUB1Q9Y5A7 615 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 TRANK1O15050 2925 aa16.16■□□□□ 0.18
DDX39A-221ENST00000593026 MAPK13O15264 365 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 TNNC2P02585 160 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 SOD2P04179 222 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 TNNI1P19237 187 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 IRS1P35568 1242 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
DDX39A-221ENST00000593026 NLRP12P59046 1061 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 ERVFC1P60507 584 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 ELAVL2Q12926 359 aaKnown RBP16.15■□□□□ 0.18
DDX39A-221ENST00000593026 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 DPCR1Q3MIW9 517 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 LMBRD2Q68DH5 695 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-221ENST00000593026 TTI2Q6NXR4 508 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 FAM186BQ8IYM0 893 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 TMEM130Q8N3G9 435 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 C3orf58Q8NDZ4 430 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 EEF2KMTQ96G04 330 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 HERC2P3Q9BVR0 1158 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 GPR62Q9BZJ7 368 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 MTMR12Q9C0I1 747 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 ZBP1Q9H171 429 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 NGRNQ9NPE2 291 aaKnown RBP16.15■□□□□ 0.18
DDX39A-221ENST00000593026 INTS13Q9NVM9 706 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 PTPRJQ12913 1337 aa16.15■□□□□ 0.18
DDX39A-221ENST00000593026 ATG2AQ2TAZ0 1938 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 FSCN2O14926 492 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 TRAPPC3O43617 180 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 EFEMP2O95967 443 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 EPB41P11171 864 aaKnown RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 KRT13P13646 458 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 CA8P35219 290 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 STX17P56962 302 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 SMC1AQ14683 1233 aaKnown RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 DUOXA2Q1HG44 320 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 PLPP4Q5VZY2 271 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 C9orf57Q5W0N0 161 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 KIAA1841Q6NSI8 718 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 CD300LGQ6UXG3 332 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 INTS8Q75QN2 995 aaKnown RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 USP37Q86T82 979 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 ZC3H3Q8IXZ2 948 aaKnown RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 OR5B17Q8NGF7 314 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 FAM84AQ96KN4 292 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 POP1Q99575 1024 aaKnown RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 MKNK1Q9BUB5 465 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms