RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 LRPAP1P30533 357 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 GUCY2FP51841 1108 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
TRIM47-206ENST00000592942 PPP2R3AQ06190 1150 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 SPATA1Q5VX52 437 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 SCARA3Q6AZY7 606 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 ARMCX5Q6P1M9 558 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 TMEM184AQ6ZMB5 413 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 ATXN2LQ8WWM7 1075 aaKnown RBP16.64■□□□□ 0.25
TRIM47-206ENST00000592942 ERCC4Q92889 916 aaPredicted RBP16.64■□□□□ 0.25
TRIM47-206ENST00000592942 FAM212AQ96EL1 285 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 KIF12Q96FN5 646 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 KLHL5Q96PQ7 755 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 RXFP1Q9HBX9 757 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 CLDND1Q9NY35 253 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 PRPF40AO75400 957 aaKnown RBP16.63■□□□□ 0.25
TRIM47-206ENST00000592942 BRCC3P46736 316 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 USP41Q3LFD5 358 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 RTP2Q5QGT7 225 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 BRSK2Q8IWQ3 736 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 EFCAB13Q8IY85 973 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 GPR65Q8IYL9 337 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 GPD1LQ8N335 351 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-206ENST00000592942 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 PPP2R3CQ969Q6 453 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 MSLNLQ96KJ4 702 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 ASB2Q96Q27 587 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 CDCA3Q99618 268 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-206ENST00000592942 MRPL17Q9NRX2 175 aaKnown RBP16.63■□□□□ 0.25
TRIM47-206ENST00000592942 DMAC2Q9NW81 257 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 UBQLN1Q9UMX0 589 aaKnown RBP16.63■□□□□ 0.25
TRIM47-206ENST00000592942 DERAQ9Y315 318 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 PCDHA5Q9Y5H7 936 aa16.63■□□□□ 0.25
TRIM47-206ENST00000592942 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-206ENST00000592942 ANO9A1A5B4 782 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 I3L4J1 428 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 C2CD2LO14523 706 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 PPEF2O14830 753 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 KIAA0391O15091 583 aaKnown RBP16.62■□□□□ 0.25
TRIM47-206ENST00000592942 BMP1P13497 986 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 KCNA5P22460 613 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 FGFR3P22607 806 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 GLUD2P49448 558 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 UBE2HP62256 183 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 MRPS5P82675 430 aaKnown RBP16.62■□□□□ 0.25
TRIM47-206ENST00000592942 LEXMQ3ZCV2 418 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 CBWD2Q8IUF1 395 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 LNX1Q8TBB1 728 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-206ENST00000592942 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 HCFC2Q9Y5Z7 792 aa16.62■□□□□ 0.25
TRIM47-206ENST00000592942 SF3B1O75533 1304 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRIM47-206ENST00000592942 TTC28Q96AY4 2481 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 VWA8A3KMH1 1905 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 H3BQ06 376 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 PIRO00625 290 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 TEX28O15482 410 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 KCNQ1P51787 676 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 BMS1Q14692 1282 aaKnown RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 TMEM132DQ14C87 1099 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 CXorf38Q8TB03 319 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 RIN2Q8WYP3 895 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 FAM84AQ96KN4 292 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 PDE11AQ9HCR9 933 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 RBAKQ9NYW8 714 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 CGNQ9P2M7 1197 aaKnown RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 BARX2Q9UMQ3 279 aaPredicted RBP16.61■□□□□ 0.25
TRIM47-206ENST00000592942 MAPK8IP1Q9UQF2 711 aa16.61■□□□□ 0.25
TRIM47-206ENST00000592942 ZNF233A6NK53 670 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 PDXKO00764 312 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 IL18RAPO95256 599 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 URODP06132 367 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 EPCAMP16422 314 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 TKTP29401 623 aaKnown RBP16.6■□□□□ 0.25
TRIM47-206ENST00000592942 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRIM47-206ENST00000592942 ELAVL2Q12926 359 aaKnown RBP16.6■□□□□ 0.25
TRIM47-206ENST00000592942 C9orf57Q5W0N0 161 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 SYCE2Q6PIF2 218 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 HS2ST1Q7LGA3 356 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 NT5DC4Q86YG4 428 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 SMYD4Q8IYR2 804 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-206ENST00000592942 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
TRIM47-206ENST00000592942 RDH13Q8NBN7 331 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 BORCS6Q96GS4 357 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 GSDMAQ96QA5 445 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 CLSTN3Q9BQT9 956 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 TTPALQ9BTX7 342 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 FNIP2Q9P278 1114 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 TRAF3IP3Q9Y228 551 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 SSX2IPQ9Y2D8 614 aa16.6■□□□□ 0.25
TRIM47-206ENST00000592942 SPTLC1O15269 473 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 ADAM12O43184 909 aa16.59■□□□□ 0.25
TRIM47-206ENST00000592942 TBC1D4O60343 1298 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms