RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 TRAPPC3O43617 180 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 ZNF131P52739 623 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 VARS2Q5ST30 1063 aaKnown RBP24.01■■□□□ 1.43
PTPN2-215ENST00000592776 AXDND1Q5T1B0 1012 aaPredicted RBP24.01■■□□□ 1.43
PTPN2-215ENST00000592776 TMEM105Q8N8V8 129 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 LARP4BQ92615 738 aaKnown RBP24.01■■□□□ 1.43
PTPN2-215ENST00000592776 FIZ1Q96SL8 496 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 PARVGQ9HBI0 331 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 HCFC1R1Q9NWW0 138 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 MTMR6Q9Y217 621 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 BACE2Q9Y5Z0 518 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 CITO14578 2027 aa24.01■■□□□ 1.43
PTPN2-215ENST00000592776 TRAK2O60296 914 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 LAMP2P13473 410 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 FSHRP23945 695 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 LIG4P49917 911 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 ARPP19P56211 112 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 SLC39A4Q6P5W5 647 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 ANKS3Q6ZW76 656 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 SLC44A3Q8N4M1 653 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 IGSF9Q9P2J2 1179 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 DUSP12Q9UNI6 340 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 NUB1Q9Y5A7 615 aa24■■□□□ 1.43
PTPN2-215ENST00000592776 LACTBL1A8MY62 500 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 H0YCG3 227 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 CLTAP09496 248 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 HNRNPA1P09651 372 aaKnown RBP eCLIP23.99■■□□□ 1.43
PTPN2-215ENST00000592776 RPL9P32969 192 aaKnown RBP23.99■■□□□ 1.43
PTPN2-215ENST00000592776 DDIT3P35638 169 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 GUCY2FP51841 1108 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 ZC2HC1CQ53FD0 456 aaPredicted RBP23.99■■□□□ 1.43
PTPN2-215ENST00000592776 DYMQ7RTS9 669 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 RPP25Q9BUL9 199 aaKnown RBP23.99■■□□□ 1.43
PTPN2-215ENST00000592776 IKZF4Q9H2S9 585 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 ZDBF2Q9HCK1 2354 aa23.99■■□□□ 1.43
PTPN2-215ENST00000592776 DOCK8Q8NF50 2099 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 TTC26A0AVF1 554 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 TISP43B9A030 160 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 ANKRD63C9JTQ0 380 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 HNRNPDLO14979 420 aaKnown RBP23.98■■□□□ 1.43
PTPN2-215ENST00000592776 FAM189A1O60320 539 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 CFHP08603 1231 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 ROR1Q01973 937 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 ITFG1Q8TB96 612 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 KIF12Q96FN5 646 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 USP28Q96RU2 1077 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 MFSD1Q9H3U5 465 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 FAM86C1Q9NVL1 165 aa23.98■■□□□ 1.43
PTPN2-215ENST00000592776 DNMT3BQ9UBC3 853 aaKnown RBP23.98■■□□□ 1.43
PTPN2-215ENST00000592776 SRPRBQ9Y5M8 271 aaKnown RBP23.98■■□□□ 1.43
PTPN2-215ENST00000592776 WDR27A2RRH5 827 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 TBC1D4O60343 1298 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 TBCAO75347 108 aaKnown RBP23.97■■□□□ 1.43
PTPN2-215ENST00000592776 PIGRP01833 764 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 NPR3P17342 541 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 MCM4P33991 863 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 MRE11P49959 708 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 PTPN5P54829 565 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 PDCD11Q14690 1871 aaKnown RBP23.97■■□□□ 1.43
PTPN2-215ENST00000592776 ZBTB6Q15916 424 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 ENOX2Q16206 610 aaKnown RBP23.97■■□□□ 1.43
PTPN2-215ENST00000592776 CWF19L1Q69YN2 538 aaKnown RBP23.97■■□□□ 1.43
PTPN2-215ENST00000592776 FLCNQ8NFG4 579 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 KCNN1Q92952 543 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 INTS4Q96HW7 963 aaKnown RBP23.97■■□□□ 1.43
PTPN2-215ENST00000592776 SUSD3Q96L08 255 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 PANK2Q9BZ23 570 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.97■■□□□ 1.432e-6■□□□□ 9.3
PTPN2-215ENST00000592776 FBXL5Q9UKA1 691 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 FBXL21Q9UKT6 434 aa23.97■■□□□ 1.43
PTPN2-215ENST00000592776 K7ELQ4 463 aaPredicted RBP23.96■■□□□ 1.43
PTPN2-215ENST00000592776 PI15O43692 258 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 HOXA9P31269 272 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 GTF2BQ00403 316 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 MRPL58Q14197 206 aaKnown RBP23.96■■□□□ 1.43
PTPN2-215ENST00000592776 ASTLQ6HA08 431 aaPredicted RBP23.96■■□□□ 1.43
PTPN2-215ENST00000592776 SLC8B1Q6J4K2 584 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 SIX5Q8N196 739 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 FAM212AQ96EL1 285 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 MSTO1Q9BUK6 570 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 PLEKHA5Q9HAU0 1116 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 TIMM13Q9Y5L4 95 aaPredicted RBP23.96■■□□□ 1.43
PTPN2-215ENST00000592776 NUMBLQ9Y6R0 609 aa23.96■■□□□ 1.43
PTPN2-215ENST00000592776 A0A0B4J269 797 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 ANHXE9PGG2 379 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 PPEF2O14830 753 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 SYN3O14994 580 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 OGTO15294 1046 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 XYLBO75191 536 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 SEC24AO95486 1093 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 HTR4Q13639 388 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 UVSSAQ2YD98 709 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 CTXN3Q4LDR2 81 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 SFR1Q86XK3 245 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 DDX12PQ92771 950 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 RPF1Q9H9Y2 349 aaKnown RBP23.95■■□□□ 1.42
PTPN2-215ENST00000592776 CCDC39Q9UFE4 941 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 CDH7Q9ULB5 785 aa23.95■■□□□ 1.42
PTPN2-215ENST00000592776 KRBA1A5PL33 1030 aa23.94■■□□□ 1.42
PTPN2-215ENST00000592776 MYMKA6NI61 221 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms