RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 JAMLQ86YT9 394 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 SEC16BQ96JE7 1060 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 CENPKQ9BS16 269 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 ROPN1BQ9BZX4 212 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-228ENST00000592705 JMJD4Q9H9V9 463 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 ROPN1Q9HAT0 212 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-228ENST00000592705 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 ERAP1Q9NZ08 941 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 C17orf102A2RUQ5 167 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 TCP11X1B4DZS4 312 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 ADM5C9JUS6 153 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 HSPA4LO95757 839 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 RPA1P27694 616 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 YWHABP31946 246 aaKnown RBP13.44□□□□□ -0.26
DNMT1-228ENST00000592705 CAP2P40123 477 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 BACE1P56817 501 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 FSCBQ5H9T9 825 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 TTI2Q6NXR4 508 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 TFR2Q9UP52 801 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 SMG5Q9UPR3 1016 aaKnown RBP13.44□□□□□ -0.26
DNMT1-228ENST00000592705 SALL1Q9NSC2 1324 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 AK9Q5TCS8 1911 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 CLGNO14967 610 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 THPOP40225 353 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 SEC23AQ15436 765 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 PTGISQ16647 500 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 HAUS8Q9BT25 410 aa13.44□□□□□ -0.26
DNMT1-228ENST00000592705 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.44□□□□□ -0.26
DNMT1-228ENST00000592705 HNRNPCL1O60812 293 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 PPP6R3Q5H9R7 873 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 KDM7AQ6ZMT4 941 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 TTC39CQ8N584 583 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 DRC3Q9H069 523 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 P4HA2O15460 535 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 CDH16O75309 829 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 SARSP49591 514 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ARSEP51690 589 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 POLE2P56282 527 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 PSMC1P62191 440 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 GRB10Q13322 594 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 RCOR2Q8IZ40 523 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ZNF668Q96K58 619 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 NUDCD1Q96RS6 583 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 TSC22D3Q99576 134 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ERP44Q9BS26 406 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 RBAKQ9NYW8 714 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 POLLQ9UGP5 575 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 AGO2Q9UKV8 859 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 MX2P20592 715 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ESRRGP62508 458 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ZC3H18Q86VM9 953 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 OR2W6PQ8NHA6 318 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 UBN1Q9NPG3 1134 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 DCTN4Q9UJW0 460 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 USP15Q9Y4E8 981 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 SPATA31D1Q6ZQQ2 1576 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 PPP4CP60510 307 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ST8SIA6P61647 398 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 SNRPFP62306 86 aaKnown RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 HERVK_113P62684 666 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ROR1Q01973 937 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 ARHGAP15Q53QZ3 475 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 FBXW10Q5XX13 1052 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 FAM83AQ86UY5 434 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 FAM129AQ9BZQ8 928 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 FOXP3Q9BZS1 431 aa13.43□□□□□ -0.26
DNMT1-228ENST00000592705 MAGED2Q9UNF1 606 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-228ENST00000592705 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 STRNO43815 780 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 PLEKP08567 350 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 RALAP11233 206 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 ITGA4P13612 1032 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 FGFR2P21802 821 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 C3orf20Q8ND61 904 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 DDX50Q9BQ39 737 aaKnown RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 PPCSQ9HAB8 311 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 RFC1P35251 1148 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 DEUP1Q05D60 604 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 TBX2Q13207 712 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 DGKZQ13574 1117 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 TAF1BQ53T94 588 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 XRRA1Q6P2D8 792 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 TRIM65Q6PJ69 517 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 ZC3H15Q8WU90 426 aaKnown RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 TRABDQ9H4I3 376 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 KPNA7A9QM74 516 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 MCUQ8NE86 351 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 SHCBP1Q8NEM2 672 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 SPDL1Q96EA4 605 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 ENTPD7Q9NQZ7 604 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 FAM50BQ9Y247 325 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms