RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 HOXB4P17483 251 aaPredicted RBP5.7□□□□□ -1.5
ERCC1-216ENST00000592444 MX2P20592 715 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 FCARP24071 287 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 MARK3P27448 753 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 COL8A1P27658 744 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 SLC11A1P49279 550 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 KPNA1P52294 538 aaPredicted RBP5.7□□□□□ -1.5
ERCC1-216ENST00000592444 DGKEP52429 567 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 UCNP55089 124 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 MLLT6P55198 1093 aaPredicted RBP5.7□□□□□ -1.5
ERCC1-216ENST00000592444 SLC14A1Q13336 389 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 DSC3Q14574 896 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 GRM4Q14833 912 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 SMAD1Q15797 465 aaKnown RBP5.7□□□□□ -1.5
ERCC1-216ENST00000592444 TTBK2Q6IQ55 1244 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 KCNV1Q6PIU1 500 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 TAS1R3Q7RTX0 852 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 TAS1R1Q7RTX1 841 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 C11orf74Q86VG3 221 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 ECHDC2Q86YB7 292 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 GLYCTKQ8IVS8 523 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 TMEM57Q8N5G2 664 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 TTC8Q8TAM2 541 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 SYTL5Q8TDW5 730 aaPredicted RBP5.7□□□□□ -1.5
ERCC1-216ENST00000592444 CSGALNACT1Q8TDX6 532 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 TMEM40Q8WWA1 233 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 LPIN3Q9BQK8 851 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 DBNDD2Q9BQY9 259 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 NUCKS1Q9H1E3 243 aaKnown RBP5.7□□□□□ -1.5
ERCC1-216ENST00000592444 NRDE2Q9H7Z3 1164 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 PRDM16Q9HAZ2 1276 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 ATP8A2Q9NTI2 1148 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 SMC4Q9NTJ3 1288 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 ZBTB40Q9NUA8 1239 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 HCFC1R1Q9NWW0 138 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 GDE1Q9NZC3 331 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 DNAJB4Q9UDY4 337 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 PCOLCE2Q9UKZ9 415 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 MKL2Q9ULH7 1088 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 SLC6A14Q9UN76 642 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 ZMYM6O95789 1325 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 KDM3AQ9Y4C1 1321 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 MYH7P12883 1935 aa5.7□□□□□ -1.5
ERCC1-216ENST00000592444 FBN1P35555 2871 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 PDCD11Q14690 1871 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 CSMD2Q7Z408 3487 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 SPECC1L-ADORA2AF8WAN1 911 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 TNFRSF10BO14763 440 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 ZNF263O14978 683 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 ATG13O75143 517 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 GJB3O75712 270 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 SOD2P04179 222 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 FURINP09958 794 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 MYCLP12524 364 aaPredicted RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 PSMC3P17980 439 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 DCTP40126 519 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 PTGER3P43115 390 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 IRX6P78412 446 aaPredicted RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 VAC14Q08AM6 782 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 EML3Q32P44 896 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 PABPC1LQ4VXU2 614 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 USP39Q53GS9 565 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 CCDC157Q569K6 752 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 ODR4Q5SWX8 454 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 CTR9Q6PD62 1173 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 LILRA6Q6PI73 481 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 C1orf228Q6PIY5 440 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 VITQ6UXI7 678 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 FAM43BQ6ZT52 329 aaPredicted RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 CYFIP1Q7L576 1253 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 FAM200AQ8TCP9 573 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 SETD7Q8WTS6 366 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 CLUAP1Q96AJ1 413 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 MSANTD3Q96H12 275 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 HIC2Q96JB3 615 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 GAD1Q99259 594 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 APOL6Q9BWW8 343 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 TPSD1Q9BZJ3 242 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 GBP3Q9H0R5 595 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 C8orf33Q9H7E9 229 aaPredicted RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 RXFP1Q9HBX9 757 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 ZFP14Q9HCL3 533 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 STK39Q9UEW8 545 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 EBF1Q9UH73 591 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 KCNH3Q9ULD8 1083 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 NOB1Q9ULX3 412 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 MTMR7Q9Y216 660 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 SSX2IPQ9Y2D8 614 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 MRPS23Q9Y3D9 190 aaKnown RBP5.69□□□□□ -1.5
ERCC1-216ENST00000592444 NOTCH4Q99466 2003 aa5.69□□□□□ -1.5
ERCC1-216ENST00000592444 KNTC1P50748 2209 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 A1L4Q6 167 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 MYBPHLA2RUH7 354 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 CARNS1A5YM72 827 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 ARNTLO00327 626 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 OIP5O43482 229 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 APBB3O95704 486 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 TGFB3P10600 412 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms