RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ADAM7Q9H2U9 754 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 ABCB11O95342 1321 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 CAPN9O14815 690 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 RAD51CO43502 376 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 TLR2O60603 784 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 ATP5HO75947 161 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 ZBED1O96006 694 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 ECHS1P30084 290 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 GTF2H1P32780 548 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 SLC16A2P36021 539 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 E2F2Q14209 437 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 SLC18A3Q16572 532 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 CTC1Q2NKJ3 1217 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 PHLDB2Q86SQ0 1253 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 TBC1D10AQ9BXI6 508 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 EDEM3Q9BZQ6 932 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 SCHIP1Q9P0W5 487 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
SMARCA4-217ENST00000591595 UFL1O94874 794 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 ERVK-9P63128 1117 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 SLC34A1Q06495 639 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 CUL1Q13616 776 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 ARL13BQ3SXY8 428 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 MFSD14BQ5SR56 506 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 KAZNQ674X7 775 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 GRAMD2AQ8IUY3 354 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 KBTBD2Q8IY47 623 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 ARHGAP24Q8N264 748 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 ITPKCQ96DU7 683 aa12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 C2orf49Q9BVC5 232 aaPredicted RBP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 ZMAT5Q9UDW3 170 aaKnown RBP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 FAF1Q9UNN5 650 aaPredicted RBP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 RPL26L1Q9UNX3 145 aaKnown RBP12.96□□□□□ -0.34
SMARCA4-217ENST00000591595 UBL4AP11441 157 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 PPP4CP60510 307 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 NAB2Q15742 525 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 GPR162Q16538 588 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 ASTE1Q2TB18 679 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 VSIG1Q86XK7 387 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 EIF1ADQ8N9N8 165 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 FGFBP2Q9BYJ0 223 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 KLHL14Q9P2G3 628 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 SPATA31A1Q5TZJ5 1347 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 ECM1Q16610 540 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 ANKDD1AQ495B1 522 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 VPS50Q96JG6 964 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 NARFQ9UHQ1 456 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 FAM47E-STBD1D6RA91 191 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 BBOX1O75936 387 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 ACTN1P12814 892 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 CPA3P15088 417 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 NR2F2P24468 414 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 MZF1P28698 734 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 ORC2Q13416 577 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 TRPC4APQ8TEL6 797 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 INPP5DQ92835 1189 aa12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-217ENST00000591595 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 POTEB3A0JP26 581 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 POTECB2RU33 542 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 STAM2O75886 525 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 PLA2G4BP0C869 781 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 GRIA2P42262 883 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 NR1D2Q14995 579 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 SYCP2LQ5T4T6 812 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 POTEBQ6S5H4 581 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 ANO5Q75V66 913 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 PRPF18Q99633 342 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 NT5C3AQ9H0P0 336 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 HAO1Q9UJM8 370 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 NOL4O94818 638 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 PFKPQ01813 784 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 INTS8Q75QN2 995 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms