RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CACNA1HO95180 2353 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 CFAP54Q96N23 3096 aa10.41□□□□□ -0.74
BRCA1-226ENST00000591534 KMT2EQ8IZD2 1858 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ZBTB39O15060 712 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 PI15O43692 258 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 RFPL2O75678 378 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 EFEMP2O95967 443 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 LMNAP02545 664 aaKnown RBP10.4□□□□□ -0.74
BRCA1-226ENST00000591534 THP07101 528 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 SPATA31D3P0C874 917 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ATP2B1P20020 1258 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 GLRA2P23416 452 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 FSHRP23945 695 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 HOXA9P31269 272 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 NEK4P51957 841 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 CLDN10P78369 228 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ARID5BQ14865 1188 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 PPP2R5AQ15172 486 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 MAPK6Q16659 721 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 FAM187BQ17R55 369 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 EARS2Q5JPH6 523 aaKnown RBP10.4□□□□□ -0.74
BRCA1-226ENST00000591534 SPATA31D4Q6ZUB0 917 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 RTL10Q7L3V2 364 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 GET4Q7L5D6 327 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ASAP3Q8TDY4 903 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ZNF707Q96C28 371 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-226ENST00000591534 GPR62Q9BZJ7 368 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 TUFT1Q9NNX1 390 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ARHGEF3Q9NR81 526 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 SLC2A4RGQ9NR83 387 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 MIOSQ9NXC5 875 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 PCDHB11Q9Y5F2 797 aa10.4□□□□□ -0.74
BRCA1-226ENST00000591534 ESPNB1AK53 854 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 TRAPPC3O43617 180 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 NARSO43776 548 aaKnown RBP10.39□□□□□ -0.75
BRCA1-226ENST00000591534 JAK2O60674 1132 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 USO1O60763 962 aaKnown RBP10.39□□□□□ -0.75
BRCA1-226ENST00000591534 ID4P47928 161 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 EFNA5P52803 228 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 PFKPQ01813 784 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 NR5A1Q13285 461 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 PRPF4BQ13523 1007 aaKnown RBP10.39□□□□□ -0.75
BRCA1-226ENST00000591534 ELOAQ14241 798 aaKnown RBP10.39□□□□□ -0.75
BRCA1-226ENST00000591534 UVSSAQ2YD98 709 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 PPM1LQ5SGD2 360 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 LILRA6Q6PI73 481 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 DCLRE1AQ6PJP8 1040 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 CEP57Q86XR8 500 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 DEPTORQ8TB45 409 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 PIGOQ8TEQ8 1089 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 RSAD2Q8WXG1 361 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 GTF3C6Q969F1 213 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 IFT74Q96LB3 600 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 MYADMQ96S97 322 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 KCTD15Q96SI1 283 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-226ENST00000591534 TBC1D17Q9HA65 648 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 KLK14Q9P0G3 267 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 CDH7Q9ULB5 785 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 CA14Q9ULX7 337 aa10.39□□□□□ -0.75
BRCA1-226ENST00000591534 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-226ENST00000591534 KRBA1A5PL33 1030 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 ARHGEF35A5YM69 484 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 ANHXE9PGG2 379 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 B4GALT5O43286 388 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 LZTS3O60299 673 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 N4BP1O75113 896 aaKnown RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 MYBP10242 640 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 MUTP22033 750 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 RPIAP49247 311 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 WNT7BP56706 349 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 ORC2Q13416 577 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 HTR4Q13639 388 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 PSMD5Q16401 504 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 DCAF4L1Q3SXM0 396 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 FAM171A1Q5VUB5 890 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 HAUS3Q68CZ6 603 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 CDCA2Q69YH5 1023 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 MAEAQ7L5Y9 396 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 VASH1Q7L8A9 365 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 DIS3L2Q8IYB7 885 aaKnown RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 NSUN7Q8NE18 718 aaKnown RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 GSTCDQ8NEC7 633 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 GPR152Q8TDT2 470 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 TNFRSF25Q93038 417 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 UROC1Q96N76 676 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 POLR3CQ9BUI4 534 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-226ENST00000591534 BCO2Q9BYV7 579 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 FZD8Q9H461 694 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 FBXW11Q9UKB1 542 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 KCNH3Q9ULD8 1083 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 LIMCH1Q9UPQ0 1083 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 KIAA1024Q9UPX6 916 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms