RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TSPAN1O60635 241 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 RNF40O75150 1001 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 EGFP01133 1207 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 MYL4P12829 197 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ATF2P15336 505 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 RXRAP19793 462 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 AXLP30530 894 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ELF1P32519 619 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 DHPSP49366 369 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 GALK1P51570 392 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 DGKEP52429 567 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ANTXR2P58335 489 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 LAMTOR4Q0VGL1 99 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 GRSF1Q12849 480 aaKnown RBP eCLIP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 GRIK3Q13003 919 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 TUSC3Q13454 348 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 HNRNPDQ14103 355 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ARHGAP29Q52LW3 1261 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 USP39Q53GS9 565 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 PRR16Q569H4 304 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ANKRD45Q5TZF3 282 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 JAKMIP3Q5VZ66 844 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 SLC23A3Q6PIS1 610 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 PCSK4Q6UW60 755 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 SYT13Q7L8C5 426 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 SLCO6A1Q86UG4 719 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 MARCH9Q86YJ5 346 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ARID3BQ8IVW6 561 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 TCEAL8Q8IYN2 117 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 DAGLBQ8NCG7 672 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 SHKBP1Q8TBC3 707 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 TMEM143Q96AN5 459 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 CHFRQ96EP1 664 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 ZNF512Q96ME7 567 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 NUSAP1Q9BXS6 441 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 GPR88Q9GZN0 384 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 NXF3Q9H4D5 531 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 CYP4F11Q9HBI6 524 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 PARP2Q9UGN5 583 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 SEPT9Q9UHD8 586 aaPredicted RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 TCEAL9Q9UHQ7 104 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 COL4A3BPQ9Y5P4 624 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 TAF6LQ9Y6J9 622 aa7.19□□□□□ -1.26
DNMT1-222ENST00000590619 MYH9P35579 1960 aaKnown RBP7.19□□□□□ -1.26
DNMT1-222ENST00000590619 OTOL1A6NHN0 477 aaPredicted RBP7.18□□□□□ -1.26
DNMT1-222ENST00000590619 PRRG1O14668 218 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 SH3BP5O60239 455 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 DDAH1O94760 285 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 APBB3O95704 486 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 CYP21A2P08686 494 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 FTH1P19P0C7X4 201 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 ITPKBP27987 946 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 ADCY7P51828 1080 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 EPHA5P54756 1037 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 NAPAP54920 295 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 ROR1Q01973 937 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 CFHR1Q03591 330 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 ELAVL2Q12926 359 aaKnown RBP7.18□□□□□ -1.26
DNMT1-222ENST00000590619 AP3B2Q13367 1082 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 SART3Q15020 963 aaKnown RBP7.18□□□□□ -1.26
DNMT1-222ENST00000590619 NAB2Q15742 525 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 IQCEQ6IPM2 695 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 SLC8B1Q6J4K2 584 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 NOTUMQ6P988 496 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 ANO5Q75V66 913 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 SYT12Q8IV01 421 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 TEX2Q8IWB9 1127 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 HDDC3Q8N4P3 179 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 PIP4K2CQ8TBX8 421 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 GJA10Q969M2 543 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 LENG9Q96B70 501 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 LRRC3Q9BY71 257 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 IL25Q9H293 177 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 UNC45AQ9H3U1 944 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 POLMQ9NP87 494 aaPredicted RBP7.18□□□□□ -1.26
DNMT1-222ENST00000590619 EML5Q05BV3 1969 aa7.18□□□□□ -1.26
DNMT1-222ENST00000590619 WDR81Q562E7 1941 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 E7EWF7 191 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 PTGESO14684 152 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 TNFRSF10BO14763 440 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 MSH4O15457 936 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 MAP3K13O43283 966 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 CHMP2AO43633 222 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 OPHN1O60890 802 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 ERLIN2O94905 339 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 ARF4P18085 180 aaPredicted RBP7.17□□□□□ -1.26
DNMT1-222ENST00000590619 TKTP29401 623 aaKnown RBP7.17□□□□□ -1.26
DNMT1-222ENST00000590619 SFNP31947 248 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 CIITAP33076 1130 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 PTGER3P43115 390 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 NPEPPSP55786 919 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 ARPP19P56211 112 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 C1QBPQ07021 282 aaKnown RBP7.17□□□□□ -1.26
DNMT1-222ENST00000590619 DMC1Q14565 340 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 AMHR2Q16671 573 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 ITPRIPL2Q3MIP1 535 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 STXBP5Q5T5C0 1151 aa7.17□□□□□ -1.26
DNMT1-222ENST00000590619 TOGARAM2Q6ZUX3 1019 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms