RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 BICD1Q96G01 975 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 INTS4Q96HW7 963 aaKnown RBP8.3□□□□□ -1.08
NPC1-208ENST00000590301 PARVGQ9HBI0 331 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 ANKFY1Q9P2R3 1169 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 CACNG4Q9UBN1 327 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 WNT16Q9UBV4 365 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 FBXL21Q9UKT6 434 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 KCNH3Q9ULD8 1083 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 NUB1Q9Y5A7 615 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 VPS37CA5D8V6 355 aaPredicted RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 ANHXE9PGG2 379 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 N4BP1O75113 896 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 TBCAO75347 108 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 FAM13AO94988 1023 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 KRT18P05783 430 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 AOC1P19801 751 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 CYP3A5P20815 502 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 TKTP29401 623 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 TXLNAP40222 546 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 LIG4P49917 911 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 MRE11P49959 708 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 VCPP55072 806 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 OSTNP61366 133 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 TCF15Q12870 199 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 SF3A1Q15459 793 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 SLC10A6Q3KNW5 377 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 AXDND1Q5T1B0 1012 aaPredicted RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 TPGS2Q68CL5 300 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 MTSS1LQ765P7 747 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 GET4Q7L5D6 327 aaPredicted RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 CD302Q8IX05 232 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 SLC44A3Q8N4M1 653 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 ZNF461Q8TAF7 563 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 SLC7A14Q8TBB6 771 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 RAD54LQ92698 747 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 SUSD3Q96L08 255 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 ZMAT2Q96NC0 199 aaKnown RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 MYADMQ96S97 322 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 RTP3Q9BQQ7 232 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 REEP2Q9BRK0 252 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 CCSER1Q9C0I3 900 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 CXCL16Q9H2A7 254 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 STK17AQ9UEE5 414 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 CDH7Q9ULB5 785 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 TBX20Q9UMR3 447 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 CDY1Q9Y6F8 540 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 MORC2Q9Y6X9 1032 aaPredicted RBP8.29□□□□□ -1.08
NPC1-208ENST00000590301 LOXHD1Q8IVV2 1947 aa8.29□□□□□ -1.08
NPC1-208ENST00000590301 A0A0B4J269 797 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 TTC26A0AVF1 554 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 ARHGEF37A1IGU5 675 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 K7ENM7 598 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 OGTO15294 1046 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 ADAM12O43184 909 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 TRAK2O60296 914 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 TBC1D4O60343 1298 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 MICAL2O94851 1124 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 ABLIM3O94929 683 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 PDGFBP01127 241 aaPredicted RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 ADRB2P07550 413 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 HARSP12081 509 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 ATF2P15336 505 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 PLCG1P19174 1290 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 LRPAP1P30533 357 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 ELF1P32519 619 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 DDIT3P35638 169 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 MATR3P43243 847 aaKnown RBP eCLIP8.28□□□□□ -1.08
NPC1-208ENST00000590301 POU5F1Q01860 360 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 SOX4Q06945 474 aaPredicted RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 HTR4Q13639 388 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 MRPL58Q14197 206 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 PABPC1LQ4VXU2 614 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 VARS2Q5ST30 1063 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 ZNF280DQ6N043 979 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 CD300LGQ6UXG3 332 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 GRASPQ7Z6J2 395 aaPredicted RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 ALYREFQ86V81 257 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 MAP4K3Q8IVH8 894 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 TCEAL8Q8IYN2 117 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 MYCT1Q8N699 235 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 C3orf58Q8NDZ4 430 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 FEZF2Q8TBJ5 459 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 LARP4BQ92615 738 aaKnown RBP8.28□□□□□ -1.08
NPC1-208ENST00000590301 HVCN1Q96D96 273 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 PLIN2Q99541 437 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 ST6GALNAC4Q9H4F1 302 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 GOLGA2P5Q9HBQ8 144 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 SLC2A4RGQ9NR83 387 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 BLOC1S4Q9NUP1 217 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 GDE1Q9NZC3 331 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 SEL1LQ9UBV2 794 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 CCDC39Q9UFE4 941 aa8.28□□□□□ -1.08
NPC1-208ENST00000590301 UBQLN1Q9UMX0 589 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms