RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 LILRB3O75022 631 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 B3GAT3O94766 335 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 NR3C1P04150 777 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 IGFBP6P24592 240 aaPredicted RBP20.32■□□□□ 0.84
MBD1-223ENST00000590215 COL19A1Q14993 1142 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 SURF1Q15526 300 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 EDRF1Q3B7T1 1238 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 TCEAL5Q5H9L2 206 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 TAS1R1Q7RTX1 841 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 MRPL43Q8N983 215 aaKnown RBP20.32■□□□□ 0.84
MBD1-223ENST00000590215 TRIML1Q8N9V2 468 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 BEST2Q8NFU1 509 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 MFSD14AQ96MC6 490 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 ENTPD7Q9NQZ7 604 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 PCDHGC5Q9Y5F6 944 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 BRWD1Q9NSI6 2320 aa20.32■□□□□ 0.84
MBD1-223ENST00000590215 EXOC3O60645 756 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 SLC34A2O95436 690 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 PPP1R2P41236 205 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 DSG1Q02413 1049 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 CYP24A1Q07973 514 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 ELAVL2Q12926 359 aaKnown RBP20.31■□□□□ 0.84
MBD1-223ENST00000590215 SMC1AQ14683 1233 aaKnown RBP20.31■□□□□ 0.84
MBD1-223ENST00000590215 BMS1Q14692 1282 aaKnown RBP20.31■□□□□ 0.84
MBD1-223ENST00000590215 MICAL1Q8TDZ2 1067 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 PDE11AQ9HCR9 933 aa20.31■□□□□ 0.84
MBD1-223ENST00000590215 ANO9A1A5B4 782 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 C2orf71A6NGG8 1288 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 HIDE1A8MVS5 230 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 MAPK13O15264 365 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 CXCL14O95715 111 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 GUCY2FP51841 1108 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 PSMD6Q15008 389 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 PTPN14Q15678 1187 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 USP41Q3LFD5 358 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 KIAA0319Q5VV43 1072 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 PLPP4Q5VZY2 271 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 ISM2Q6H9L7 571 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 MICALL1Q8N3F8 863 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 TMEM130Q8N3G9 435 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 RDH13Q8NBN7 331 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 NOC3LQ8WTT2 800 aaKnown RBP20.3■□□□□ 0.84
MBD1-223ENST00000590215 PPP2R3CQ969Q6 453 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 DHTKD1Q96HY7 919 aaPredicted RBP20.3■□□□□ 0.84
MBD1-223ENST00000590215 GZF1Q9H116 711 aaPredicted RBP20.3■□□□□ 0.84
MBD1-223ENST00000590215 NUP62CLQ9H1M0 184 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 EYSQ5T1H1 3165 aa20.3■□□□□ 0.84
MBD1-223ENST00000590215 REV3LO60673 3130 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 PPP1R3GB7ZBB8 358 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 BIN1O00499 593 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 PIRO00625 290 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 TRAPPC3O43617 180 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 NCK2O43639 380 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 MBD3O95983 291 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 CD44P16070 742 aaKnown RBP20.29■□□□□ 0.84
MBD1-223ENST00000590215 PAX3P23760 479 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 NR2F2P24468 414 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 MCM4P33991 863 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 AARSP49588 968 aaKnown RBP eCLIP20.29■□□□□ 0.84
MBD1-223ENST00000590215 MCCD1P59942 119 aaPredicted RBP20.29■□□□□ 0.84
MBD1-223ENST00000590215 HYAL1Q12794 435 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 CCDC85BQ15834 202 aaPredicted RBP20.29■□□□□ 0.84
MBD1-223ENST00000590215 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 FOXR2Q6PJQ5 311 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 ADGRD2Q7Z7M1 963 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 ZC3H3Q8IXZ2 948 aaKnown RBP20.29■□□□□ 0.84
MBD1-223ENST00000590215 CXorf38Q8TB03 319 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 HASPINQ8TF76 798 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 CACTINQ8WUQ7 758 aaKnown RBP20.29■□□□□ 0.84
MBD1-223ENST00000590215 CDCA3Q99618 268 aaPredicted RBP20.29■□□□□ 0.84
MBD1-223ENST00000590215 INTS13Q9NVM9 706 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 DPP3Q9NY33 737 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 SSX2IPQ9Y2D8 614 aa20.29■□□□□ 0.84
MBD1-223ENST00000590215 PRUNE2Q8WUY3 3088 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 CSPG5O95196 566 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 FGFR3P22607 806 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 CCNE1P24864 410 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 RPL13P26373 211 aaKnown RBP20.28■□□□□ 0.84
MBD1-223ENST00000590215 GLUD2P49448 558 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 CASP4P49662 377 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 STIM1Q13586 685 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.28■□□□□ 0.84
MBD1-223ENST00000590215 WDR49Q8IV35 697 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 C1orf127Q8N9H9 656 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 TTPALQ9BTX7 342 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 RXFP1Q9HBX9 757 aa20.28■□□□□ 0.84
MBD1-223ENST00000590215 MRPL17Q9NRX2 175 aaKnown RBP20.28■□□□□ 0.84
MBD1-223ENST00000590215 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PSMA7O14818 248 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PPEF2O14830 753 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 URODP06132 367 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 BRCC3P46736 316 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 PMS1P54277 932 aaKnown RBP20.27■□□□□ 0.84
MBD1-223ENST00000590215 CLDN10P78369 228 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 TFAMQ00059 246 aaKnown RBP20.27■□□□□ 0.84
MBD1-223ENST00000590215 LRRC63Q05C16 580 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 ADAM9Q13443 819 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 DUSP6Q16828 381 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 CTC1Q2NKJ3 1217 aa20.27■□□□□ 0.84
MBD1-223ENST00000590215 FAM171A1Q5VUB5 890 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms