RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ASIC1P78348 528 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 KRT85P78386 507 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 KCNA1Q09470 495 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 POSTNQ15063 836 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
TPM4-212ENST00000590180 E2F4Q16254 413 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 PDXDC1Q6P996 788 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 PIK3R5Q8WYR1 880 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 HVCN1Q96D96 273 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 CHAMP1Q96JM3 812 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 SPATA32Q96LK8 384 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 CLSTN3Q9BQT9 956 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 KCNH3Q9ULD8 1083 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
TPM4-212ENST00000590180 DCXO43602 365 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 PRPF6O94906 941 aaKnown RBP13.14□□□□□ -0.31
TPM4-212ENST00000590180 TKTP29401 623 aaKnown RBP13.14□□□□□ -0.31
TPM4-212ENST00000590180 MCM4P33991 863 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 OR1D2P34982 312 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 AFMP43652 599 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
TPM4-212ENST00000590180 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 LILRA6Q6PI73 481 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 GPR149Q86SP6 731 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 CD302Q8IX05 232 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 KREMEN2Q8NCW0 462 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 PLEKHA4Q9H4M7 779 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 POMKQ9H5K3 350 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
TPM4-212ENST00000590180 UBQLN1Q9UMX0 589 aaKnown RBP13.14□□□□□ -0.31
TPM4-212ENST00000590180 NR2E1Q9Y466 385 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
TPM4-212ENST00000590180 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 ADAM12O43184 909 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 FAM189A1O60320 539 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 RFPL2O75678 378 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 PPP1R37O75864 691 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 C1RP00736 705 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 CYP3A5P20815 502 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 GUCY2FP51841 1108 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 CASP5P51878 434 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 ALCAMQ13740 583 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 ZBTB6Q15916 424 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 JADE1Q6IE81 842 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 STXBP4Q6ZWJ1 553 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 TMEM130Q8N3G9 435 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 FEZF2Q8TBJ5 459 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
TPM4-212ENST00000590180 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 LEO1Q8WVC0 666 aaPredicted RBP13.13□□□□□ -0.31
TPM4-212ENST00000590180 HPS3Q969F9 1004 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 TSPAN18Q96SJ8 248 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 C7orf25Q9BPX7 421 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 PYM1Q9BRP8 204 aaKnown RBP13.13□□□□□ -0.31
TPM4-212ENST00000590180 TRIM9Q9C026 710 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 BLZF1Q9H2G9 400 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 TMEM206Q9H813 350 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 SERTAD1Q9UHV2 236 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 MUTYHQ9UIF7 546 aa13.13□□□□□ -0.31
TPM4-212ENST00000590180 CITO14578 2027 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 FAM86C2PA6NEL3 165 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 CMA1P23946 247 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 CASP1P29466 404 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 ADSSP30520 456 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 ARPP19P56211 112 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 RAB33AQ14088 237 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 TMEM31Q5JXX7 168 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
TPM4-212ENST00000590180 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 CMASQ8NFW8 434 aaPredicted RBP13.12□□□□□ -0.31
TPM4-212ENST00000590180 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
TPM4-212ENST00000590180 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 FAM213AQ9BRX8 229 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 PCIF1Q9H4Z3 704 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 MAGEF1Q9HAY2 307 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.12□□□□□ -0.31
TPM4-212ENST00000590180 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
TPM4-212ENST00000590180 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 H7C4K7 107 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 SYN3O14994 580 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 ZMYND10O75800 440 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
TPM4-212ENST00000590180 ADRB2P07550 413 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 GARTP22102 1010 aa13.11□□□□□ -0.31
TPM4-212ENST00000590180 LRPAP1P30533 357 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms