RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 ROR1Q01973 937 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 SLC5A9Q2M3M2 681 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 SLC8B1Q6J4K2 584 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 MPZL3Q6UWV2 235 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 RTL10Q7L3V2 364 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 C1orf210Q8IVY1 113 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 ZNF461Q8TAF7 563 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 MCRS1Q96EZ8 462 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 DOCK6Q96HP0 2047 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 ZBTB45Q96K62 511 aaPredicted RBP12.92□□□□□ -0.34
MBD1-218ENST00000589541 PLIN2Q99541 437 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
MBD1-218ENST00000589541 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 NUB1Q9Y5A7 615 aa12.92□□□□□ -0.34
MBD1-218ENST00000589541 EP300Q09472 2414 aaPredicted RBP12.92□□□□□ -0.34
MBD1-218ENST00000589541 WDR27A2RRH5 827 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 MEFVO15553 781 aaPredicted RBP12.91□□□□□ -0.34
MBD1-218ENST00000589541 ABLIM3O94929 683 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 LRG1P02750 347 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 ELF1P32519 619 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 RPL9P32969 192 aaKnown RBP12.91□□□□□ -0.34
MBD1-218ENST00000589541 STRN3Q13033 797 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 MLF2Q15773 248 aaPredicted RBP12.91□□□□□ -0.34
MBD1-218ENST00000589541 SLC44A4Q53GD3 710 aa12.91□□□□□ -0.34
MBD1-218ENST00000589541 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 KANSL1LA0AUZ9 987 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 ARHGEF37A1IGU5 675 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 H7C4K7 107 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 SYN3O14994 580 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 TOM1L1O75674 476 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 SEC24AO95486 1093 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 LMNAP02545 664 aaKnown RBP12.9□□□□□ -0.34
MBD1-218ENST00000589541 SP9P0CG40 484 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 MAPTP10636 758 aaKnown RBP12.9□□□□□ -0.34
MBD1-218ENST00000589541 PLS3P13797 630 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 CEBPBP17676 345 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 PTPN2P17706 415 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 CD72P21854 359 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 MCM4P33991 863 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 SMTNP53814 917 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 PFKPQ01813 784 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
MBD1-218ENST00000589541 UBXN2BQ14CS0 331 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 CTXN3Q4LDR2 81 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
MBD1-218ENST00000589541 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 SEMA4AQ9H3S1 761 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 CYP4F11Q9HBI6 524 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 GDE1Q9NZC3 331 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
MBD1-218ENST00000589541 KIF3AQ9Y496 699 aa12.9□□□□□ -0.34
MBD1-218ENST00000589541 DMXL1Q9Y485 3027 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 DCHS1Q96JQ0 3298 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 NPHP3-ACAD11A0A0J9YXS1 232 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 FAM170BA6NMN3 283 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 CLDN3O15551 220 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 TBC1D4O60343 1298 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 ECI2O75521 394 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 ATF2P15336 505 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
MBD1-218ENST00000589541 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 PRKCQQ04759 706 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 SPAG1Q07617 926 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 SLC10A6Q3KNW5 377 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 POTEHQ6S545 545 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 TMEM130Q8N3G9 435 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 SYT2Q8N9I0 419 aaPredicted RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 TCEAL4Q96EI5 215 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 SUSD3Q96L08 255 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 PLA2G2FQ9BZM2 168 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 SPATA6Q9NWH7 488 aaPredicted RBP12.89□□□□□ -0.35
MBD1-218ENST00000589541 TUBGCP4Q9UGJ1 667 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 INSL5Q9Y5Q6 135 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
MBD1-218ENST00000589541 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
MBD1-218ENST00000589541 PLA2G4BP0C869 781 aa12.88□□□□□ -0.35
MBD1-218ENST00000589541 CXCL8P10145 99 aa12.88□□□□□ -0.35
MBD1-218ENST00000589541 SLC12A3P55017 1021 aa12.88□□□□□ -0.35
MBD1-218ENST00000589541 ADCY1Q08828 1119 aa12.88□□□□□ -0.35
MBD1-218ENST00000589541 HYIQ5T013 277 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms