RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 DCLRE1AQ6PJP8 1040 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 SV2AQ7L0J3 742 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 TRAPPC11Q7Z392 1133 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 COLEC11Q9BWP8 271 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 LIMA1Q9UHB6 759 aaKnown RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-218ENST00000589294 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 CITO14578 2027 aa13.15□□□□□ -0.3
DNMT1-218ENST00000589294 PTPRJQ12913 1337 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 ANO9A1A5B4 782 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 PIRO00625 290 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 N4BP1O75113 896 aaKnown RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 GALTP07902 379 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 TPM2P07951 284 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 TRIM49P0CI25 452 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 TRIM49CP0CI26 452 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 LAG3P18627 525 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 GCLMP48507 274 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 BCAR1P56945 870 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 PPP3CAQ08209 521 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 CETN1Q12798 172 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 MAN2A1Q16706 1144 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 UPP1Q16831 310 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 SPOUT1Q5T280 376 aaKnown RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 C9orf57Q5W0N0 161 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 KRT39Q6A163 491 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 MTMR12Q9C0I1 747 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 R3HCC1Q9Y3T6 440 aaKnown RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 PCDHB12Q9Y5F1 795 aa13.14□□□□□ -0.31
DNMT1-218ENST00000589294 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
DNMT1-218ENST00000589294 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
DNMT1-218ENST00000589294 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 NRP1O14786 923 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 PHACTR2O75167 634 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 RB1P06400 928 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 ATICP31939 592 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 BMPR1AP36894 532 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 PNPLA4P41247 253 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 OR1G1P47890 313 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 FMO5P49326 533 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 CLCNKBP51801 687 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 KRT31Q15323 416 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 HSP90AA4PQ58FG1 418 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
DNMT1-218ENST00000589294 KCNT2Q6UVM3 1135 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 C1orf127Q8N9H9 656 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 NDST4Q9H3R1 872 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 DNAJB4Q9UDY4 337 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 STK39Q9UEW8 545 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 TUBGCP4Q9UGJ1 667 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 COQ4Q9Y3A0 265 aa13.13□□□□□ -0.31
DNMT1-218ENST00000589294 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-218ENST00000589294 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
DNMT1-218ENST00000589294 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 PODXLO00592 558 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 ZC3H11AO75152 810 aaKnown RBP eCLIP13.12□□□□□ -0.31
DNMT1-218ENST00000589294 B3GAT3O94766 335 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-218ENST00000589294 ITGB3P05106 788 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 CA3P07451 260 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 MYOGP15173 224 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 PPM1AP35813 382 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 SLC11A1P49279 550 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 MXI1P50539 228 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 MYO1EQ12965 1108 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 BIRC3Q13489 604 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 TRPC3Q13507 836 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 SGSM1Q2NKQ1 1148 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 MIIPQ5JXC2 388 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
DNMT1-218ENST00000589294 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 COLGALT1Q8NBJ5 622 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 TAF4BQ92750 862 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 GOLGA2P5Q9HBQ8 144 aa13.12□□□□□ -0.31
DNMT1-218ENST00000589294 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms