RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 C8orf48Q96LL4 319 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 NUP88Q99567 741 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 RTFDC1Q9BY42 306 aaPredicted RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 PCGF6Q9BYE7 350 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 RHOBTB2Q9BYZ6 727 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 REXO4Q9GZR2 422 aaKnown RBP4.53□□□□□ -1.68
SMAD4-207ENST00000589076 KCTD10Q9H3F6 313 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 IFT122Q9HBG6 1241 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 DPP7Q9UHL4 492 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 ATP11BQ9Y2G3 1177 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 NOX1Q9Y5S8 564 aa4.53□□□□□ -1.68
SMAD4-207ENST00000589076 GOLGA6CA6NDK9 693 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 GOLGA6BA6NDN3 693 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 MYADML2A6NDP7 307 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 TBKBP1A7MCY6 615 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 PROB1E7EW31 1015 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 CDKL5O76039 1030 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 GOLGA6DP0CG33 693 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 PF4V1P10720 104 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 FDXRP22570 491 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 CYP2C19P33261 490 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 MGAT5Q09328 741 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 TRIM25Q14258 630 aaKnown RBP4.52□□□□□ -1.69
SMAD4-207ENST00000589076 PDCD4Q53EL6 469 aaKnown RBP4.52□□□□□ -1.69
SMAD4-207ENST00000589076 NXNQ6DKJ4 435 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 CXorf57Q6NSI4 855 aaKnown RBP4.52□□□□□ -1.69
SMAD4-207ENST00000589076 WDR75Q8IWA0 830 aaKnown RBP4.52□□□□□ -1.69
SMAD4-207ENST00000589076 PAWRQ96IZ0 340 aaKnown RBP4.52□□□□□ -1.69
SMAD4-207ENST00000589076 TEKT5Q96M29 485 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 LRFN3Q9BTN0 628 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 GOLGA6AQ9NYA3 693 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 DKK2Q9UBU2 259 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 USP15Q9Y4E8 981 aaPredicted RBP4.52□□□□□ -1.69
SMAD4-207ENST00000589076 CDY2AQ9Y6F7 541 aa4.52□□□□□ -1.69
SMAD4-207ENST00000589076 KIF3BO15066 747 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 PRAMEF4O60810 478 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 SEC24DO94855 1032 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-207ENST00000589076 SPDEFO95238 335 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 OSMP13725 252 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 AKAP5P24588 427 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 CTGFP29279 349 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 PLA2G5P39877 138 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 PTH2RP49190 550 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 ADKP55263 362 aaKnown RBP4.51□□□□□ -1.69
SMAD4-207ENST00000589076 MEF2AQ02078 507 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-207ENST00000589076 PPARAQ07869 468 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 GTF2H3Q13889 308 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMAD4-207ENST00000589076 ZNF384Q8TF68 577 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 ASB10Q8WXI3 467 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 SLC29A3Q9BZD2 475 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 PRDM12Q9H4Q4 367 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMAD4-207ENST00000589076 LRIT1Q9P2V4 623 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 FRMD4BQ9Y2L6 1034 aa4.51□□□□□ -1.69
SMAD4-207ENST00000589076 COL11A2P13942 1736 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-207ENST00000589076 ZNF185O15231 689 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 NDUFS2O75306 463 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 IL33O95760 270 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 GASTP01350 101 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 IGLV2-14P01704 120 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 LTA4HP09960 611 aaKnown RBP4.5□□□□□ -1.69
SMAD4-207ENST00000589076 EGR2P11161 476 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-207ENST00000589076 C5AR1P21730 350 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 CDK17Q00537 523 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 MLC1Q15049 377 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 UBE3CQ15386 1083 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 MIER2Q8N344 545 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 MAGEB6Q8N7X4 407 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 TSPEARQ8WU66 669 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 SLC2A13Q96QE2 648 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 HEPHQ9BQS7 1158 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 ACE2Q9BYF1 805 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-207ENST00000589076 PRDM13Q9H4Q3 707 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 TBCCD1Q9NVR7 557 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 EVLQ9UI08 416 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-207ENST00000589076 ZBTB21Q9ULJ3 1066 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 NOB1Q9ULX3 412 aaKnown RBP4.5□□□□□ -1.69
SMAD4-207ENST00000589076 MAP3K2Q9Y2U5 619 aa4.5□□□□□ -1.69
SMAD4-207ENST00000589076 MAST3O60307 1309 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 A0A1W2PR48 441 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 ZRANB2O95218 330 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMAD4-207ENST00000589076 MPLP40238 635 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 SLC16A1P53985 500 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 NHLH1Q02575 133 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 HLTFQ14527 1009 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMAD4-207ENST00000589076 BMT2Q1RMZ1 405 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 GFOD2Q3B7J2 385 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 MINDY4Q4G0A6 757 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 MUM1L1Q5H9M0 696 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 RRP12Q5JTH9 1297 aaKnown RBP4.49□□□□□ -1.69
SMAD4-207ENST00000589076 FAM180AQ6UWF9 173 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 BTNL9Q6UXG8 535 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 C14orf80Q86SX3 495 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 ARHGEF25Q86VW2 580 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 TPH2Q8IWU9 490 aa4.49□□□□□ -1.69
SMAD4-207ENST00000589076 MSL3Q8N5Y2 521 aaKnown RBP4.49□□□□□ -1.69
SMAD4-207ENST00000589076 PPM1NQ8N819 430 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms