RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 GATA4P43694 442 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 CORO7P57737 925 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 HSP90AB4PQ58FF6 505 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 TTC39AQ5SRH9 613 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 IL31Q6EBC2 164 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 APOBEC3HQ6NTF7 200 aaKnown RBP9.03□□□□□ -0.96
ATG4D-210ENST00000588972 LZTR1Q8N653 840 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 LINC01599Q8WXQ3 324 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 KIF1BPQ96EK5 621 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 C16orf92Q96LL3 132 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 USP25Q9UHP3 1055 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 DENND2AQ9ULE3 1009 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
ATG4D-210ENST00000588972 LAMA2P24043 3122 aaKnown RBP9.02□□□□□ -0.96
ATG4D-210ENST00000588972 CDH23Q9H251 3354 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 ALPK3Q96L96 1907 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 CYP26A1O43174 497 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 CREB3O43889 395 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 SGPL1O95470 568 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 IGLV1-40P01703 118 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 AKAP5P24588 427 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 PRDX5P30044 214 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 MOGSQ13724 837 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 EPHA7Q15375 998 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 IFIT1BQ5T764 474 aaKnown RBP9.02□□□□□ -0.97
ATG4D-210ENST00000588972 MIGA2Q7L4E1 593 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 SPATA5Q8NB90 893 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 FAM151AQ8WW52 585 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 IL17RAQ96F46 866 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 DNAJC28Q9NX36 388 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 HMG20BQ9P0W2 317 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 ZC3H7BQ9UGR2 993 aaKnown RBP9.02□□□□□ -0.97
ATG4D-210ENST00000588972 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
ATG4D-210ENST00000588972 MSRAQ9UJ68 235 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 ZNF112Q9UJU3 913 aa9.02□□□□□ -0.97
ATG4D-210ENST00000588972 PTPRFP10586 1907 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 AK9Q5TCS8 1911 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 EYSQ5T1H1 3165 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 CXCL11O14625 94 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 TMEM253P0C7T8 217 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 CYP2C8P10632 490 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 MTNR1BP49286 362 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 NEK3P51956 506 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 SRSF2Q01130 221 aaKnown RBP9.01□□□□□ -0.97
ATG4D-210ENST00000588972 EMC4Q5J8M3 183 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 CCDC158Q5M9N0 1113 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 CATSPEREQ5SY80 951 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 KCTD1Q719H9 257 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 RBM12BQ8IXT5 1001 aaKnown RBP9.01□□□□□ -0.97
ATG4D-210ENST00000588972 CLASRPQ8N2M8 674 aaKnown RBP9.01□□□□□ -0.97
ATG4D-210ENST00000588972 SLC35G2Q8TBE7 412 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 ASB11Q8WXH4 323 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 HRASLS5Q96KN8 279 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 LRRCC1Q9C099 1032 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 DCTPP1Q9H773 170 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 PAK6Q9NQU5 681 aaPredicted RBP9.01□□□□□ -0.97
ATG4D-210ENST00000588972 USP36Q9P275 1121 aaKnown RBP9.01□□□□□ -0.97
ATG4D-210ENST00000588972 ABCF2Q9UG63 623 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 GABRQQ9UN88 632 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 TELO2Q9Y4R8 837 aa9.01□□□□□ -0.97
ATG4D-210ENST00000588972 ANO9A1A5B4 782 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 FAM90A27PA6NNH2 459 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 TNPO2O14787 897 aaKnown RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 AP1G1O43747 822 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 TFRCP02786 760 aaKnown RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 IFIT2P09913 472 aaKnown RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 UQCRFS1P1P0C7P4 283 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 AGXTP21549 392 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 ENPP1P22413 925 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 SDHAP31040 664 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 KIR2DL1P43626 348 aaPredicted RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 KIR2DL2P43627 348 aaPredicted RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 FNTBP49356 437 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 FLT3LGP49771 235 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 EPHA5P54756 1037 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 PICALMQ13492 652 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 FSCN1Q16658 493 aaKnown RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 LONRF3Q496Y0 759 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 HSF5Q4G112 596 aaPredicted RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 COBLL1Q53SF7 1204 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 STEAP3Q658P3 488 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 FASTKD5Q7L8L6 764 aaKnown RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 CXorf67Q86X51 503 aaPredicted RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 ASIC4Q96FT7 647 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 DEFB118Q96PH6 123 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 TAAR9Q96RI9 348 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 ARPC5LQ9BPX5 153 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 SEMA4AQ9H3S1 761 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 C1orf112Q9NSG2 853 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 STAP2Q9UGK3 403 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 SLC45A1Q9Y2W3 748 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 GPR45Q9Y5Y3 372 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 PDS5AQ29RF7 1337 aaKnown RBP9□□□□□ -0.97
ATG4D-210ENST00000588972 SALL1Q9NSC2 1324 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 DOCK1Q14185 1865 aa9□□□□□ -0.97
ATG4D-210ENST00000588972 ATRNL1Q5VV63 1379 aa8.99□□□□□ -0.97
ATG4D-210ENST00000588972 A0A0G2JLL6 359 aaPredicted RBP8.99□□□□□ -0.97
ATG4D-210ENST00000588972 SLC27A2O14975 620 aa8.99□□□□□ -0.97
ATG4D-210ENST00000588972 GSC2O15499 205 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms