RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 CNGA1P29973 690 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 HOXA13P31271 388 aaPredicted RBP17.49■□□□□ 0.39
RANBP3-209ENST00000587411 PTP4A2Q12974 167 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 LLGL1Q15334 1064 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 CCNG2Q16589 344 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 ZNF398Q8TD17 642 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 PARD3BQ8TEW8 1205 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
RANBP3-209ENST00000587411 ACCSQ96QU6 501 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 WDR18Q9BV38 432 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 TRABDQ9H4I3 376 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 PCIF1Q9H4Z3 704 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 PPCSQ9HAB8 311 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 STOML1Q9UBI4 398 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 TOM1O60784 492 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 GAS7O60861 476 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 ADRA2BP18089 450 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 MARK3P27448 753 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 BIRC2Q13490 618 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 MFN1Q8IWA4 741 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 PWWP2AQ96N64 755 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 SMC6Q96SB8 1091 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 WDR11Q9BZH6 1224 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 TMEM117Q9H0C3 514 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 AVENQ9NQS1 362 aaPredicted RBP17.49■□□□□ 0.39
RANBP3-209ENST00000587411 BCS1LQ9Y276 419 aa17.49■□□□□ 0.39
RANBP3-209ENST00000587411 ECE2O60344 883 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 SMIM24O75264 130 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 VPS41P49754 854 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 INHBEP58166 350 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 SNAP25P60880 206 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 ZNF449Q6P9G9 518 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 GMCL1Q96IK5 515 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 RBM15Q96T37 977 aaKnown RBP eCLIP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 VCXQ9H320 206 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 DENND2DQ9H6A0 471 aaPredicted RBP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 ATRNL1Q5VV63 1379 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 SPAG7O75391 227 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 PAPOLAP51003 745 aaKnown RBP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 SNRPFP62306 86 aaKnown RBP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 IKQ13123 557 aaPredicted RBP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 MUM1Q2TAK8 710 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 IRGCQ6NXR0 463 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 DAW1Q8N136 415 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 GMCL1P1Q8NEA9 526 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 HSPBP1Q9NZL4 362 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 CPSF2Q9P2I0 782 aaKnown RBP17.48■□□□□ 0.39
RANBP3-209ENST00000587411 POLLQ9UGP5 575 aa17.48■□□□□ 0.39
RANBP3-209ENST00000587411 C2CD2LO14523 706 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 KLF1Q13351 362 aaPredicted RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 CLEC16AQ2KHT3 1053 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 THEMIS2Q5TEJ8 643 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 FYB2Q5VWT5 728 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 CCDC125Q86Z20 511 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 CERKQ8TCT0 537 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 DDX27Q96GQ7 796 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 SLCO1B3Q9NPD5 702 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 PAPOLBQ9NRJ5 636 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 ZFP69BQ9UJL9 534 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 R3HDM2Q9Y2K5 976 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 ASB3Q9Y575 518 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 NVLO15381 856 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 PDHA1P08559 390 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 MYBL1P10243 752 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 MCCD1P59942 119 aaPredicted RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 ROR2Q01974 943 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 ANKS1BQ7Z6G8 1248 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 SPOCK2Q92563 424 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 TRIM11Q96F44 468 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
RANBP3-209ENST00000587411 CBWD1Q9BRT8 395 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 HERPUD2Q9BSE4 406 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 KIAA1586Q9HCI6 787 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 ACP6Q9NPH0 428 aa17.47■□□□□ 0.39
RANBP3-209ENST00000587411 F5H6K3 240 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 CBX6O95503 412 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 GCAP28676 217 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 VHLP40337 213 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 TRAF1Q13077 416 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 RASA2Q15283 850 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 CWF19L1Q69YN2 538 aaKnown RBP17.46■□□□□ 0.39
RANBP3-209ENST00000587411 CDC42EP5Q6NZY7 148 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 TTC8Q8TAM2 541 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 TEKT4Q8WW24 435 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 DDX1Q92499 740 aaKnown RBP17.46■□□□□ 0.39
RANBP3-209ENST00000587411 TUBB6Q9BUF5 446 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 CYLDQ9NQC7 956 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 ETAA1Q9NY74 926 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 WRAP73Q9P2S5 460 aaPredicted RBP17.46■□□□□ 0.39
RANBP3-209ENST00000587411 BBOX1O75936 387 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 KRT15P19012 456 aa17.46■□□□□ 0.39
RANBP3-209ENST00000587411 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
RANBP3-209ENST00000587411 TAF1BQ53T94 588 aaPredicted RBP17.46■□□□□ 0.39
RANBP3-209ENST00000587411 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms