RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 KIZQ2M2Z5 673 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 CNKSR3Q6P9H4 555 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 RHPN2Q8IUC4 686 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 CBWD2Q8IUF1 395 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 GPD1LQ8N335 351 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 ZSWIM2Q8NEG5 633 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 TMEM143Q96AN5 459 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 RPGRIP1Q96KN7 1286 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 PRO3102Q9H379 93 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 NAGPAQ9UK23 515 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 CEP290O15078 2479 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 IGKV6-21A0A0C4DH24 114 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 HNRNPDLO14979 420 aaKnown RBP19.94■□□□□ 0.78
RETREG3-205ENST00000586870 CXCL10P02778 98 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 GLRA2P23416 452 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 CRYBB1P53674 252 aaPredicted RBP19.94■□□□□ 0.78
RETREG3-205ENST00000586870 STRN3Q13033 797 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 PHLDB3Q6NSJ2 640 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 TAS1R3Q7RTX0 852 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 USP38Q8NB14 1042 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 DBF4BQ8NFT6 615 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 DEPTORQ8TB45 409 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 PARD3BQ8TEW8 1205 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 PSPC1Q8WXF1 523 aaKnown RBP19.94■□□□□ 0.78
RETREG3-205ENST00000586870 BICD1Q96G01 975 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 TMEM117Q9H0C3 514 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 SALL4Q9UJQ4 1053 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 INTUQ9ULD6 942 aa19.94■□□□□ 0.78
RETREG3-205ENST00000586870 PIGRP01833 764 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 GPNMBQ14956 572 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 KRT39Q6A163 491 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 ALKBH5Q6P6C2 394 aaKnown RBP19.93■□□□□ 0.78
RETREG3-205ENST00000586870 LINC01465Q8N7H1 131 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 ASAP3Q8TDY4 903 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 HERVK_113Q902F9 699 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 SAAL1Q96ER3 474 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 ZNF668Q96K58 619 aaPredicted RBP19.93■□□□□ 0.78
RETREG3-205ENST00000586870 OSMRQ99650 979 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 GPR88Q9GZN0 384 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 TMEM134Q9H6X4 195 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 TMEM8AQ9HCN3 771 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 SNX12Q9UMY4 172 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 COQ4Q9Y3A0 265 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 STYXL1Q9Y6J8 313 aa19.93■□□□□ 0.78
RETREG3-205ENST00000586870 LIG4P49917 911 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 NAP1L1P55209 391 aaKnown RBP19.92■□□□□ 0.78
RETREG3-205ENST00000586870 CYP24A1Q07973 514 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 NFX1Q12986 1120 aaKnown RBP19.92■□□□□ 0.78
RETREG3-205ENST00000586870 DRP2Q13474 957 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 LPIN1Q14693 890 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 FBXO47Q5MNV8 452 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 TSHZ1Q6ZSZ6 1077 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
RETREG3-205ENST00000586870 APBB2Q92870 758 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 SLC4A7Q9Y6M7 1214 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 SQORQ9Y6N5 450 aa19.92■□□□□ 0.78
RETREG3-205ENST00000586870 DDX3XO00571 662 aaKnown RBP eCLIP19.91■□□□□ 0.783e-16■■■■□ 25.4
RETREG3-205ENST00000586870 ASAP2O43150 1006 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 RPS6KA5O75582 802 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 BAIAP3O94812 1187 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 TCP1P17987 556 aaKnown RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 PAK2Q13177 524 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 MKRN4PQ13434 485 aaPredicted RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 IFI16Q16666 785 aaKnown RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 PLEKHG4Q58EX7 1191 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 SLFN12LQ6IEE8 588 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 SLC30A5Q8TAD4 765 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 NLRP4Q96MN2 994 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 CCDC94Q9BW85 323 aaPredicted RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 GCOM2Q9BZD3 368 aaPredicted RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 CDHR5Q9HBB8 845 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 UBE2TQ9NPD8 197 aaPredicted RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 HYOU1Q9Y4L1 999 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 KAT6AQ92794 2004 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 ABHD14A-ACY1A0A1B0GW23 586 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 ZNF233A6NK53 670 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 LRRIQ3A6PVS8 624 aaPredicted RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 K7ERI5 159 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 GPR182O15218 404 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 BUB1O43683 1085 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 EXTL3O43909 919 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 EFCAB14O75071 495 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 GPR32O75388 356 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 H2AFZP0C0S5 128 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 SRGAP2CP0DJJ0 459 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 CD52P31358 61 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 GPC3P51654 580 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
RETREG3-205ENST00000586870 ARHGAP44Q17R89 818 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 H2AFVQ71UI9 128 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 MSANTD4Q8NCY6 345 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 SYT11Q9BT88 431 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 PCDHGC5Q9Y5F6 944 aa19.91■□□□□ 0.78
RETREG3-205ENST00000586870 SIP14410 1827 aa19.9■□□□□ 0.78
RETREG3-205ENST00000586870 LRRIQ4A6NIV6 560 aa19.9■□□□□ 0.78
RETREG3-205ENST00000586870 TUBBP07437 444 aa19.9■□□□□ 0.78
RETREG3-205ENST00000586870 PNMA6AP0CW24 399 aaPredicted RBP19.9■□□□□ 0.78
RETREG3-205ENST00000586870 CLCN6P51797 869 aa19.9■□□□□ 0.78
RETREG3-205ENST00000586870 TFDP1Q14186 410 aa19.9■□□□□ 0.78
RETREG3-205ENST00000586870 ZNF410Q86VK4 478 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms