RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TCHPQ9BT92 498 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.2■□□□□ 0.98
TRAF4-216ENST00000586813 CNTN3Q9P232 1028 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 R4GN57 208 aa21.2■□□□□ 0.98
TRAF4-216ENST00000586813 WDR27A2RRH5 827 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 SLC16A4O15374 487 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 RHOP08100 348 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 MLF2Q15773 248 aaPredicted RBP21.19■□□□□ 0.98
TRAF4-216ENST00000586813 SLC5A9Q2M3M2 681 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 C1orf210Q8IVY1 113 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 DDX23Q9BUQ8 820 aaKnown RBP21.19■□□□□ 0.98
TRAF4-216ENST00000586813 TIPINQ9BVW5 301 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 SEMA4AQ9H3S1 761 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 MRPS23Q9Y3D9 190 aaKnown RBP21.19■□□□□ 0.98
TRAF4-216ENST00000586813 CACNA1IQ9P0X4 2223 aa21.19■□□□□ 0.98
TRAF4-216ENST00000586813 ZNF292O60281 2723 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 KANSL1LA0AUZ9 987 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 ARHGEF37A1IGU5 675 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 SYN3O14994 580 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 MEFVO15553 781 aaPredicted RBP21.18■□□□□ 0.98
TRAF4-216ENST00000586813 LRRN2O75325 713 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 ABLIM3O94929 683 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 HARSP12081 509 aaKnown RBP21.18■□□□□ 0.98
TRAF4-216ENST00000586813 GUCY2CP25092 1073 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 PFKPQ01813 784 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 PRKCQQ04759 706 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 C18orf25Q96B23 403 aaPredicted RBP21.18■□□□□ 0.98
TRAF4-216ENST00000586813 NTPCRQ9BSD7 190 aaKnown RBP21.18■□□□□ 0.98
TRAF4-216ENST00000586813 AVENQ9NQS1 362 aaPredicted RBP21.18■□□□□ 0.98
TRAF4-216ENST00000586813 ANKFY1Q9P2R3 1169 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 WDR87Q6ZQQ6 2873 aa21.18■□□□□ 0.98
TRAF4-216ENST00000586813 SFI1A8K8P3 1242 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 PRRG1O14668 218 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 TBC1D4O60343 1298 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 LMNAP02545 664 aaKnown RBP21.17■□□□□ 0.98
TRAF4-216ENST00000586813 LRG1P02750 347 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 SP9P0CG40 484 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 RPL9P32969 192 aaKnown RBP21.17■□□□□ 0.98
TRAF4-216ENST00000586813 NOLC1Q14978 699 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRAF4-216ENST00000586813 ZRSR1Q15695 479 aaKnown RBP21.17■□□□□ 0.98
TRAF4-216ENST00000586813 SLC44A4Q53GD3 710 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 ZC3H14Q6PJT7 736 aaKnown RBP21.17■□□□□ 0.98
TRAF4-216ENST00000586813 KCNG4Q8TDN1 519 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 SPIRE2Q8WWL2 714 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 GDE1Q9NZC3 331 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 NUB1Q9Y5A7 615 aa21.17■□□□□ 0.98
TRAF4-216ENST00000586813 H7C4K7 107 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 ECI2O75521 394 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 TOM1L1O75674 476 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 ATF2P15336 505 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 CEBPBP17676 345 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 ELF1P32519 619 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 ARPP19P56211 112 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 ATP2C1P98194 919 aaPredicted RBP21.16■□□□□ 0.98
TRAF4-216ENST00000586813 RAD51AP2Q09MP3 1159 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 STRN3Q13033 797 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 RILPL1Q5EBL4 403 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 HYIQ5T013 277 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 MCRS1Q96EZ8 462 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 ZBTB45Q96K62 511 aaPredicted RBP21.16■□□□□ 0.98
TRAF4-216ENST00000586813 FBXL5Q9UKA1 691 aa21.16■□□□□ 0.98
TRAF4-216ENST00000586813 COL4A2P08572 1712 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 FRYLO94915 3013 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 MAPTP10636 758 aaKnown RBP21.15■□□□□ 0.98
TRAF4-216ENST00000586813 PLS3P13797 630 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 PTPN2P17706 415 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 FOXK2Q01167 660 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 MRPL58Q14197 206 aaKnown RBP21.15■□□□□ 0.98
TRAF4-216ENST00000586813 UBXN2BQ14CS0 331 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 ZPBP2Q6X784 338 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 TCEAL8Q8IYN2 117 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 MAML2Q8IZL2 1156 aaPredicted RBP21.15■□□□□ 0.98
TRAF4-216ENST00000586813 TMEM161BQ8NDZ6 487 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 SUSD3Q96L08 255 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 PNMA5Q96PV4 448 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 BCO2Q9BYV7 579 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 CYP4F11Q9HBI6 524 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 MTF2Q9Y483 593 aaPredicted RBP21.15■□□□□ 0.98
TRAF4-216ENST00000586813 KIF3AQ9Y496 699 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 INSL5Q9Y5Q6 135 aa21.15■□□□□ 0.98
TRAF4-216ENST00000586813 DMXL1Q9Y485 3027 aa21.14■□□□□ 0.98
TRAF4-216ENST00000586813 SEC24AO95486 1093 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 MCM4P33991 863 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 SMTNP53814 917 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 SLC10A6Q3KNW5 377 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 CTXN3Q4LDR2 81 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 SEZ6Q53EL9 994 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 PRSS36Q5K4E3 855 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 TPGS2Q68CL5 300 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 MCTP1Q6DN14 999 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 POTEHQ6S545 545 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 SYT2Q8N9I0 419 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-216ENST00000586813 CORO1BQ9BR76 489 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 OSBPL6Q9BZF3 934 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 PLA2G2FQ9BZM2 168 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 LTB4R2Q9NPC1 389 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 TUBGCP4Q9UGJ1 667 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 KCNG1Q9UIX4 513 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 TICRRQ7Z2Z1 1910 aa21.14■□□□□ 0.97
TRAF4-216ENST00000586813 CD72P21854 359 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms