RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 NDST4Q9H3R1 872 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 TAB2Q9NYJ8 693 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 TUBGCP4Q9UGJ1 667 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 ITGA11Q9UKX5 1188 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 P4HA2O15460 535 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 LRPAP1P30533 357 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 GCLMP48507 274 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 FMO5P49326 533 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 SOX4Q06945 474 aaPredicted RBP18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 KRT39Q6A163 491 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 TRAPPC11Q7Z392 1133 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 C1orf127Q8N9H9 656 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 CXorf38Q8TB03 319 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 UROC1Q96N76 676 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 RAD9AQ99638 391 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 DPP3Q9NY33 737 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 GBF1Q92538 1859 aa18.33■□□□□ 0.52
PRKCSH-203ENST00000586486 KIAA1671Q9BY89 1806 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 RNASELQ05823 741 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 CBWD6Q4V339 395 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 CBWD3Q5JTY5 395 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 CBWD5Q5RIA9 395 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 TDRD10Q5VZ19 366 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 TDHQ8IZJ6 230 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 COQ4Q9Y3A0 265 aa18.32■□□□□ 0.52
PRKCSH-203ENST00000586486 ANO9A1A5B4 782 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 GTPBP10A4D1E9 387 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 LGALS16A8MUM7 142 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 TLL1O43897 1013 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 B4GALT3O60512 393 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 DDHD2O94830 711 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 FANCCQ00597 558 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 MYL7Q01449 175 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 BTG3Q14201 252 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 PAN2Q504Q3 1202 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 ZNF280BQ86YH2 543 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 COLGALT2Q8IYK4 626 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 TMEM175Q9BSA9 504 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 VPS16Q9H269 839 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 NRDE2Q9H7Z3 1164 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 MMRN2Q9H8L6 949 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 SIX4Q9UIU6 781 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 RANBP2P49792 3224 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 A0A1B0GTH6 734 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 CARNS1A5YM72 827 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 SERPINC1P01008 464 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 BIRC3Q13489 604 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 SARM1Q6SZW1 724 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 FAM193BQ96PV7 902 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 CWH43Q9H720 699 aa18.31■□□□□ 0.52
PRKCSH-203ENST00000586486 PIRO00625 290 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 VNN1O95497 513 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 ITGB3P05106 788 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 RBP5P82980 135 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 CETN1Q12798 172 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 UPP1Q16831 310 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 FILIP1LQ4L180 1135 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 C9orf57Q5W0N0 161 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 FBXL13Q8NEE6 735 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 DNAJB4Q9UDY4 337 aa18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 MRPL42Q9Y6G3 142 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-203ENST00000586486 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 CASTOR2A6NHX0 329 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 PHACTR2O75167 634 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 POLR2BP30876 1174 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 NCOA4Q13772 614 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 EPC2Q52LR7 807 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 FAM109BQ6ICB4 259 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 FIBCD1Q8N539 461 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 TAS1R2Q8TE23 839 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 RTN4Q9NQC3 1192 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 HCSTQ9UBK5 93 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
PRKCSH-203ENST00000586486 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 A0A1W2PPC1 479 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 TMEM189-UBE2V1I3L0A0 370 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 PODXLO00592 558 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 ZC3H11AO75152 810 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 HLA-DRAP01903 254 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 LAG3P18627 525 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 PNPLA4P41247 253 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 PIK3CAP42336 1068 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 CLCNKBP51801 687 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 FKBP15Q5T1M5 1219 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 TMEM130Q8N3G9 435 aa18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 CLP1Q92989 425 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-203ENST00000586486 ZNF560Q96MR9 790 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms