RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 CDR2LQ86X02 465 aaPredicted RBP22.02■■□□□ 1.12
ATG4D-204ENST00000586417 PPM1KQ8N3J5 372 aa22.02■■□□□ 1.12
ATG4D-204ENST00000586417 OR5B17Q8NGF7 314 aa22.02■■□□□ 1.12
ATG4D-204ENST00000586417 ABHD8Q96I13 439 aa22.02■■□□□ 1.12
ATG4D-204ENST00000586417 DDX3XO00571 662 aaKnown RBP eCLIP22.02■■□□□ 1.113e-7■■■■□ 19.9
ATG4D-204ENST00000586417 URI1O94763 535 aaPredicted RBP22.02■■□□□ 1.11
ATG4D-204ENST00000586417 HLA-DRAP01903 254 aa22.02■■□□□ 1.11
ATG4D-204ENST00000586417 CKBP12277 381 aa22.02■■□□□ 1.11
ATG4D-204ENST00000586417 CAPN2P17655 700 aa22.02■■□□□ 1.11
ATG4D-204ENST00000586417 CEP120Q8N960 986 aa22.02■■□□□ 1.11
ATG4D-204ENST00000586417 SHC3Q92529 594 aa22.02■■□□□ 1.11
ATG4D-204ENST00000586417 NAGPAQ9UK23 515 aa22.02■■□□□ 1.11
ATG4D-204ENST00000586417 MROH7Q68CQ1 1323 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 DARSP14868 501 aaKnown RBP22.01■■□□□ 1.11
ATG4D-204ENST00000586417 CRYBB1P53674 252 aaPredicted RBP22.01■■□□□ 1.11
ATG4D-204ENST00000586417 CDC42EP1Q00587 391 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 BMS1Q14692 1282 aaKnown RBP22.01■■□□□ 1.11
ATG4D-204ENST00000586417 SLC30A5Q8TAD4 765 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 LNX1Q8TBB1 728 aaPredicted RBP22.01■■□□□ 1.11
ATG4D-204ENST00000586417 TATDN2Q93075 761 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 ELMO3Q96BJ8 720 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 PI4K2AQ9BTU6 479 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 GCOM2Q9BZD3 368 aaPredicted RBP22.01■■□□□ 1.11
ATG4D-204ENST00000586417 PDZD7Q9H5P4 517 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 TRPV2Q9Y5S1 764 aa22.01■■□□□ 1.11
ATG4D-204ENST00000586417 CCDC172P0C7W6 258 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 EIF4BP23588 611 aaKnown RBP22■■□□□ 1.11
ATG4D-204ENST00000586417 MFAP3P55082 362 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 NAB2Q15742 525 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 TRAF7Q6Q0C0 670 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 SRGAP1Q7Z6B7 1085 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 WDR49Q8IV35 697 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 THNSL1Q8IYQ7 743 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 FAM71AQ8IYT1 594 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 TXLNBQ8N3L3 684 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 TOX2Q96NM4 488 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 SALL4Q9UJQ4 1053 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 ANK1P16157 1881 aa22■■□□□ 1.11
ATG4D-204ENST00000586417 MACROD2A1Z1Q3 448 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 DCDC2CA8MYV0 355 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 CTIFO43310 598 aaKnown RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 TSPAN1O60635 241 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 ARF4P18085 180 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 GCNT1Q02742 428 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 TMEM132AQ24JP5 1023 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 C10orf76Q5T2E6 689 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 SECISBP2LQ93073 1101 aaKnown RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 PACSIN1Q9BY11 444 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 LUC7LQ9NQ29 371 aaKnown RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 PCDH10Q9P2E7 1040 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 UMODL1Q5DID0 1318 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 CTAGE9A4FU28 777 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 M0QZ92 97 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 TLR3O15455 904 aaKnown RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 MCF2P10911 925 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 PIK3CAP42336 1068 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 AP3M2P53677 418 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 BIRC3Q13489 604 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 ALKBH5Q6P6C2 394 aaKnown RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 VPS36Q86VN1 386 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 CPB2Q96IY4 423 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 NAPGQ99747 312 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 NOC2LQ9Y3T9 749 aaKnown RBP21.99■■□□□ 1.11
ATG4D-204ENST00000586417 ATP8B3O60423 1300 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 ALPK3Q96L96 1907 aa21.99■■□□□ 1.11
ATG4D-204ENST00000586417 MBTPS1Q14703 1052 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 SURF1Q15526 300 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 FAM26DQ5JW98 314 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 GLYCTKQ8IVS8 523 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 TMEM192Q8IY95 271 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 MRFAP1Q9Y605 127 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 CAPN6Q9Y6Q1 641 aa21.98■■□□□ 1.11
ATG4D-204ENST00000586417 MEFVO15553 781 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-204ENST00000586417 RPLP2P05387 115 aaKnown RBP21.97■■□□□ 1.11
ATG4D-204ENST00000586417 SCARA3Q6AZY7 606 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 ENOSF1Q7L5Y1 443 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 CAGE1Q8TC20 777 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 AGO3Q9H9G7 860 aaKnown RBP21.97■■□□□ 1.11
ATG4D-204ENST00000586417 APOBEC3GQ9HC16 384 aaKnown RBP21.97■■□□□ 1.11
ATG4D-204ENST00000586417 C1orf112Q9NSG2 853 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 SLU7O95391 586 aaKnown RBP21.97■■□□□ 1.11
ATG4D-204ENST00000586417 OSTNP61366 133 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 FAM228AQ86W67 206 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 EFCAB13Q8IY85 973 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 ZNF710Q8N1W2 664 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 SLC20A1Q8WUM9 679 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 FAM81BQ96LP2 452 aa21.97■■□□□ 1.11
ATG4D-204ENST00000586417 A0A1B0GUA9 196 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 CAND2O75155 1236 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 MOCS3O95396 460 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 CXCL8P10145 99 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 GHRP10912 638 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 AMPD2Q01433 879 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 WDR44Q5JSH3 913 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 FBXO47Q5MNV8 452 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 SPOPLQ6IQ16 392 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 CATSPER4Q7RTX7 472 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 RNF10Q8N5U6 811 aaKnown RBP21.96■■□□□ 1.11
ATG4D-204ENST00000586417 EPS8L1Q8TE68 723 aa21.96■■□□□ 1.11
ATG4D-204ENST00000586417 FAM212AQ96EL1 285 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms