RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NFKBIBQ15653 356 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 CCDC40Q4G0X9 1142 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 ANKRD40Q6AI12 368 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 CENPPQ6IPU0 288 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 KIAA1841Q6NSI8 718 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 LRRC55Q6ZSA7 311 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 EPHX3Q9H6B9 360 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 CWH43Q9H720 699 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 UBE2ZQ9H832 354 aaPredicted RBP15.01□□□□□ -0.01
TRAF4-215ENST00000584944 PDE11AQ9HCR9 933 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 DNAJB4Q9UDY4 337 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 RWDD2AQ9UIY3 292 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 C2CD2Q9Y426 696 aa15.01□□□□□ -0.01
TRAF4-215ENST00000584944 PPP1R3GB7ZBB8 358 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 NT5C1B-RDH14C9J2C7 533 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 FAM189A1O60320 539 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 STX10O60499 249 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 FGF18O76093 207 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 B3GAT3O94766 335 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 DDHD2O94830 711 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 CSPG5O95196 566 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 NFICP08651 508 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 KRT19P08727 400 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 SLC11A1P49279 550 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 CYP24A1Q07973 514 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 DUOXA2Q1HG44 320 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 TCERG1LQ5VWI1 586 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 ALKAL1Q6UXT8 129 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 INTS8Q75QN2 995 aaKnown RBP15□□□□□ -0.01
TRAF4-215ENST00000584944 COLGALT2Q8IYK4 626 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 KLHL23Q8NBE8 558 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 C18orf25Q96B23 403 aaPredicted RBP15□□□□□ -0.01
TRAF4-215ENST00000584944 PPP1R10Q96QC0 940 aaKnown RBP15□□□□□ -0.01
TRAF4-215ENST00000584944 MIOSQ9NXC5 875 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 TMEM63CQ9P1W3 806 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 MAGEC2Q9UBF1 373 aaPredicted RBP15□□□□□ -0.01
TRAF4-215ENST00000584944 HCSTQ9UBK5 93 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 PLAGL2Q9UPG8 496 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 MYO7AQ13402 2215 aa15□□□□□ -0.01
TRAF4-215ENST00000584944 TRIM49BA6NDI0 452 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 PODXLO00592 558 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 NRP1O14786 923 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 SLC16A3O15427 465 aaKnown RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 GNA14O95837 355 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 GALTP07902 379 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 CYP3A5P20815 502 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 BMP6P22004 513 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 DSC1Q08554 894 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 ELAVL2Q12926 359 aaKnown RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 BIRC3Q13489 604 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 TRPC3Q13507 836 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 PSMD6Q15008 389 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 NFIL3Q16649 462 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 DPCR1Q3MIW9 517 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 XKR4Q5GH76 650 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 CRELD2Q6UXH1 353 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 GSTCDQ8NEC7 633 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 KHSRPQ92945 711 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 PPP2R3CQ969Q6 453 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 MRPL38Q96DV4 380 aaKnown RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 EEF2KMTQ96G04 330 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 CEP63Q96MT8 703 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 ALG13Q9NP73 1137 aaKnown RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 ENTPD7Q9NQZ7 604 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 DPP3Q9NY33 737 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 ARMCX3Q9UH62 379 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-215ENST00000584944 COL4A6Q14031 1691 aa14.99□□□□□ -0.01
TRAF4-215ENST00000584944 SF3B1O75533 1304 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ARHGEF37A1IGU5 675 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 C5orf67F2Z3F1 127 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 H3BNC9 293 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 MAPK13O15264 365 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ERCC5P28715 1186 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-215ENST00000584944 CLCNKBP51801 687 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 VAMP7P51809 220 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 AP3M2P53677 418 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 UBE3AQ05086 875 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 MYO1EQ12965 1108 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 LEXMQ3ZCV2 418 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ZCWPW2Q504Y3 356 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 DCAF17Q5H9S7 520 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-215ENST00000584944 FAM114A1Q8IWE2 563 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 CCDC150Q8NCX0 1101 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ZSWIM2Q8NEG5 633 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-215ENST00000584944 HASPINQ8TF76 798 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 RABGGTAQ92696 567 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 IGSF21Q96ID5 467 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 ZMAT2Q96NC0 199 aaKnown RBP14.98□□□□□ -0.01
TRAF4-215ENST00000584944 CGRRF1Q99675 332 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 MKNK1Q9BUB5 465 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 GOLGA2P5Q9HBQ8 144 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 METTL14Q9HCE5 456 aaKnown RBP14.98□□□□□ -0.01
TRAF4-215ENST00000584944 CD320Q9NPF0 282 aa14.98□□□□□ -0.01
TRAF4-215ENST00000584944 DMAC2Q9NW81 257 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms