RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MCEEQ96PE7 176 aa11□□□□□ -0.65
RFFL-212ENST00000584655 CALN1Q9BXU9 219 aa11□□□□□ -0.65
RFFL-212ENST00000584655 VPS33BQ9H267 617 aa11□□□□□ -0.65
RFFL-212ENST00000584655 RNF39Q9H2S5 420 aa11□□□□□ -0.65
RFFL-212ENST00000584655 ERAP1Q9NZ08 941 aa11□□□□□ -0.65
RFFL-212ENST00000584655 FLRT1Q9NZU1 646 aa11□□□□□ -0.65
RFFL-212ENST00000584655 RPTORQ8N122 1335 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 SART1O43290 800 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 KIF4AO95239 1232 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 PLA2G4AP47712 749 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 MAP3K10Q02779 954 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 CKAP4Q07065 602 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 PPIL2Q13356 520 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 ACOT1Q86TX2 421 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 EPS8L1Q8TE68 723 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 EIF2AQ9BY44 585 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 MRPL4Q9BYD3 311 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 NXF3Q9H4D5 531 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 NGRNQ9NPE2 291 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 PIH1D1Q9NWS0 290 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 CXCL11O14625 94 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 PPP2R5DQ14738 602 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 PPP6R3Q5H9R7 873 aaPredicted RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 SELENOOQ9BVL4 669 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 NUDT5Q9UKK9 219 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 LRRD1A4D1F6 860 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 LACTBL1A8MY62 500 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 DKC1O60832 514 aaKnown RBP eCLIP10.99□□□□□ -0.65
RFFL-212ENST00000584655 TNNC2P02585 160 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 GPC3P51654 580 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 ZNF131P52739 623 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 JADE1Q6IE81 842 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 C10orf67Q8IYJ2 551 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 RNPC3Q96LT9 517 aaKnown RBP10.99□□□□□ -0.65
RFFL-212ENST00000584655 SENP7Q9BQF6 1050 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
RFFL-212ENST00000584655 MYADML2A6NDP7 307 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 RAB6CQ53S08 254 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 PLEKHH3Q7Z736 793 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 NEK9Q8TD19 979 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 ATP8B4Q8TF62 1192 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 THOC1Q96FV9 657 aaKnown RBP10.98□□□□□ -0.65
RFFL-212ENST00000584655 IWS1Q96ST2 819 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 TINF2Q9BSI4 451 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 RAB6CQ9H0N0 254 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 SMARCAD1Q9H4L7 1026 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 DBR1Q9UK59 544 aaKnown RBP10.98□□□□□ -0.65
RFFL-212ENST00000584655 ADCY3O60266 1144 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
RFFL-212ENST00000584655 FLT3P36888 993 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
RFFL-212ENST00000584655 TAF5Q15542 800 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 GRIK4Q16099 956 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 OLFML2BQ68BL8 750 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 OR6B2Q6IFH4 312 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 PAIP2Q9BPZ3 127 aaKnown RBP10.98□□□□□ -0.65
RFFL-212ENST00000584655 AP5M1Q9H0R1 490 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 CCDC78A2IDD5 438 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 ACSL3O95573 720 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 SNAI1O95863 264 aaPredicted RBP10.98□□□□□ -0.65
RFFL-212ENST00000584655 GH1P01241 217 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 PPP2R5AQ15172 486 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 USP37Q86T82 979 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 EFCAB13Q8IY85 973 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 ADAM32Q8TC27 787 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 TMEM8AQ9HCN3 771 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 EVPLQ92817 2033 aa10.98□□□□□ -0.65
RFFL-212ENST00000584655 M0QYV0 167 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
RFFL-212ENST00000584655 UPP2O95045 317 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 PYGMP11217 842 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 TCP1P17987 556 aaKnown RBP10.97□□□□□ -0.65
RFFL-212ENST00000584655 AMPD2Q01433 879 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CRHR2Q13324 411 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CEP85LQ5SZL2 805 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 B3GNT9Q6UX72 402 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CISHQ9NSE2 258 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 GABRQQ9UN88 632 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CASTOR2A6NHX0 329 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 F8VP50 259 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 TULP2O00295 520 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 POMCP01189 267 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 LCP1P13796 627 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CAPN2P17655 700 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 PBX3P40426 434 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 GTF2A2P52657 109 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 DUOXA2Q1HG44 320 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 B3GNT5Q9BYG0 378 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 MAGEB5Q9BZ81 275 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 A0A1W2PQJ5 194 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 SLC16A3O15427 465 aaKnown RBP10.97□□□□□ -0.65
RFFL-212ENST00000584655 EXTL3O43909 919 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 CCDC172P0C7W6 258 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 ZSCAN5DPP0CG00 497 aa10.97□□□□□ -0.65
RFFL-212ENST00000584655 GHRP10912 638 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms