RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
GGA3-219ENST00000584550 ASAP3Q8TDY4 903 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 RGL1Q9NZL6 768 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.61
GGA3-219ENST00000584550 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
GGA3-219ENST00000584550 F5P12259 2224 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 I3L4J1 428 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 K7ESF4 209 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 PRRG1O14668 218 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 PTGESO14684 152 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 FOXD2O60548 495 aaPredicted RBP11.26□□□□□ -0.61
GGA3-219ENST00000584550 DKC1O60832 514 aaKnown RBP eCLIP11.26□□□□□ -0.61
GGA3-219ENST00000584550 LRG1P02750 347 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 POU2F2P09086 479 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 GJA1P17302 382 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 PSMC3P17980 439 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 ATP2B1P20020 1258 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 SPINK2P20155 84 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 CNR2P34972 360 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 SOX9P48436 509 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 ARPP19P56211 112 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
GGA3-219ENST00000584550 CAPSQ13938 189 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 TFDP1Q14186 410 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 MXD4Q14582 209 aaPredicted RBP11.26□□□□□ -0.61
GGA3-219ENST00000584550 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 PSAPL1Q6NUJ1 521 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 UNQ6494/PRO21346Q6UXR6 183 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 OTUD6AQ7L8S5 288 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 MAP4K3Q8IVH8 894 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 SPEM1Q8N4L4 309 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 TTC8Q8TAM2 541 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 LXNQ9BS40 222 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 IER2Q9BTL4 223 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 SNTG2Q9NY99 539 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 VAV3Q9UKW4 847 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 COL4A2P08572 1712 aa11.26□□□□□ -0.61
GGA3-219ENST00000584550 ARID2Q68CP9 1835 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 PDCD11Q14690 1871 aaKnown RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 GREB1Q4ZG55 1949 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 A0A1B0GUA9 196 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 SLC38A8A6NNN8 435 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 ZNF263O14978 683 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 MARCH6O60337 910 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 THP07101 528 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 ELF1P32519 619 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 CCR2P41597 374 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 PXNP49023 591 aaPredicted RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 LIMK1P53667 647 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 ELAVL2Q12926 359 aaKnown RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 FOXC1Q12948 553 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 PPP2R5CQ13362 524 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 PCBP1Q15365 356 aaKnown RBP eCLIP11.25□□□□□ -0.61
GGA3-219ENST00000584550 NCAPH2Q6IBW4 605 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 PDXDC1Q6P996 788 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.25□□□□□ -0.61
GGA3-219ENST00000584550 TPH2Q8IWU9 490 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 DYDC2Q96IM9 177 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 ASB16Q96NS5 453 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 MTRRQ9UBK8 725 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 NBEAQ8NFP9 2946 aa11.25□□□□□ -0.61
GGA3-219ENST00000584550 ZFYVE26Q68DK2 2539 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 A0A087WWV3 80 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 GIPC1O14908 333 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 B3GAT3O94766 335 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 ZNF806P0C7X5 589 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 FGFR3P22607 806 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 GLRA2P23416 452 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 GJB2P29033 226 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 KPNA1P52294 538 aaPredicted RBP11.24□□□□□ -0.61
GGA3-219ENST00000584550 PTGDRQ13258 359 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 PDZD4Q76G19 769 aaPredicted RBP11.24□□□□□ -0.61
GGA3-219ENST00000584550 MAEAQ7L5Y9 396 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 KBTBD6Q86V97 674 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 NOSTRINQ8IVI9 506 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 C4orf19Q8IY42 314 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 CSGALNACT1Q8TDX6 532 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 LSM14BQ9BX40 385 aaKnown RBP11.24□□□□□ -0.61
GGA3-219ENST00000584550 CYP4F11Q9HBI6 524 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 USP20Q9Y2K6 914 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 KIF3AQ9Y496 699 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 PPME1Q9Y570 386 aa11.24□□□□□ -0.61
GGA3-219ENST00000584550 NCANO14594 1321 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms