RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 ATP11BQ9Y2G3 1177 aa9.94□□□□□ -0.82
CASC3-209ENST00000583902 LACTBL1A8MY62 500 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 C9IYK1 514 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 CSDE1O75534 798 aaKnown RBP9.93□□□□□ -0.82
CASC3-209ENST00000583902 RECQL4O94761 1208 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 THP07101 528 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 TRIM49P0CI25 452 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 TRIM49CP0CI26 452 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 UCHL3P15374 230 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 MFAP3P55082 362 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 BPIFB4P59827 614 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 PPP3CAQ08209 521 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 KCNMA1Q12791 1236 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 PPIGQ13427 754 aaKnown RBP eCLIP9.93□□□□□ -0.82
CASC3-209ENST00000583902 BIRC3Q13489 604 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 IKBKEQ14164 716 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 ZBTB6Q15916 424 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 KLHDC7AQ5VTJ3 777 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 MFSD5Q6N075 450 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 GLB1LQ6UWU2 654 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 TRAPPC11Q7Z392 1133 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 ECHDC2Q86YB7 292 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 TMTC1Q8IUR5 882 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 TXLNBQ8N3L3 684 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 SMG8Q8ND04 991 aaKnown RBP9.93□□□□□ -0.82
CASC3-209ENST00000583902 LMO3Q8TAP4 145 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 DIS3LQ8TF46 1054 aaKnown RBP9.93□□□□□ -0.82
CASC3-209ENST00000583902 DNAJC7Q99615 494 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 EIF2AQ9BY44 585 aaKnown RBP9.93□□□□□ -0.82
CASC3-209ENST00000583902 MRPL9Q9BYD2 267 aaKnown RBP9.93□□□□□ -0.82
CASC3-209ENST00000583902 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 RSAD1Q9HA92 442 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 SNTG2Q9NY99 539 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 PLAGL2Q9UPG8 496 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 TDRD15B5MCY1 1934 aaKnown RBP9.93□□□□□ -0.82
CASC3-209ENST00000583902 PCNTO95613 3336 aa9.93□□□□□ -0.82
CASC3-209ENST00000583902 MICAL3Q7RTP6 2002 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 SMIM28A0A1B0GU29 152 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 NBNO60934 754 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 MFAP3LO75121 409 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 GFPT2O94808 682 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 ASS1P00966 412 aaKnown RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 RAG1P15918 1043 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 FGFR4P22455 802 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 LRPAP1P30533 357 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 TNFSF9P41273 254 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 PIK3CAP42336 1068 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 KCNJ6P48051 423 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 OSTNP61366 133 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 DLG4P78352 724 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 TFAMQ00059 246 aaKnown RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 GRIK3Q13003 919 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 NCOA4Q13772 614 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 LRRC26Q2I0M4 334 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 CBWD6Q4V339 395 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 CBWD3Q5JTY5 395 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 CBWD5Q5RIA9 395 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 JADE1Q6IE81 842 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 PPP1R2P3Q6NXS1 205 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 ZNF598Q86UK7 904 aaKnown RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 VPS36Q86VN1 386 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 URGCPQ8TCY9 931 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 PLEKHO2Q8TD55 490 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 PPP1R13LQ8WUF5 828 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 SPAG5Q96R06 1193 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 LSM14BQ9BX40 385 aaKnown RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 TMEM121BQ9BXQ6 578 aaPredicted RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 INTS2Q9H0H0 1204 aaKnown RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 TMX1Q9H3N1 280 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 NXF3Q9H4D5 531 aaKnown RBP9.92□□□□□ -0.82
CASC3-209ENST00000583902 CYP3A43Q9HB55 503 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 DPP3Q9NY33 737 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 AIPL1Q9NZN9 384 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 STK39Q9UEW8 545 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 PARP2Q9UGN5 583 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 PCDHB7Q9Y5E2 793 aa9.92□□□□□ -0.82
CASC3-209ENST00000583902 UMODL1Q5DID0 1318 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 CCP110O43303 1012 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 HLA-DRAP01903 254 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 GYPCP04921 128 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 FERP16591 822 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 FECHP22830 423 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 CASP14P31944 242 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 KRT9P35527 623 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 STAT1P42224 750 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 ZBTB41Q5SVQ8 909 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 SFMBT2Q5VUG0 894 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 TDRD10Q5VZ19 366 aaKnown RBP9.91□□□□□ -0.82
CASC3-209ENST00000583902 DPH6Q7L8W6 267 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 CCDC186Q7Z3E2 898 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 CDR2LQ86X02 465 aaPredicted RBP9.91□□□□□ -0.82
CASC3-209ENST00000583902 NPAS4Q8IUM7 802 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 LRRC8AQ8IWT6 810 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 CCDC170Q8IYT3 715 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 CEP120Q8N960 986 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 SPC24Q8NBT2 197 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 ZSWIM2Q8NEG5 633 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 DBF4BQ8NFT6 615 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms