RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 POLD4Q9HCU8 107 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 LTB4R2Q9NPC1 389 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 FAM170BA6NMN3 283 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 I3L4J1 428 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 KINO60870 393 aaKnown RBP22.47■■□□□ 1.19
SRSF1-206ENST00000583741 B3GAT3O94766 335 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 TKTP29401 623 aaKnown RBP22.47■■□□□ 1.19
SRSF1-206ENST00000583741 ZNF528Q3MIS6 628 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 DEPTORQ8TB45 409 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 DDX27Q96GQ7 796 aaKnown RBP22.47■■□□□ 1.19
SRSF1-206ENST00000583741 OSBPL6Q9BZF3 934 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 GDPD2Q9HCC8 539 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 KCNH3Q9ULD8 1083 aa22.47■■□□□ 1.19
SRSF1-206ENST00000583741 SPTBN2O15020 2390 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 LAMTOR5O43504 91 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 PFKPQ01813 784 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 CEBPZQ03701 1054 aaKnown RBP22.46■■□□□ 1.19
SRSF1-206ENST00000583741 UPP1Q16831 310 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 DCAF4L1Q3SXM0 396 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 NT5DC1Q5TFE4 455 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 PLA2G2FQ9BZM2 168 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 FBXO4Q9UKT5 387 aa22.46■■□□□ 1.19
SRSF1-206ENST00000583741 ARHGEF35A5YM69 484 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 RPA1P27694 616 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 TRAPPC10P48553 1259 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 TOB1P50616 345 aaPredicted RBP22.45■■□□□ 1.18
SRSF1-206ENST00000583741 PUM1Q14671 1186 aaKnown RBP eCLIP22.45■■□□□ 1.18
SRSF1-206ENST00000583741 MCRS1Q96EZ8 462 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 SPATA32Q96LK8 384 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 DLL3Q9NYJ7 618 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 MRPS23Q9Y3D9 190 aaKnown RBP22.45■■□□□ 1.18
SRSF1-206ENST00000583741 BACE2Q9Y5Z0 518 aa22.45■■□□□ 1.18
SRSF1-206ENST00000583741 RHOP08100 348 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 TARSP26639 723 aaKnown RBP22.44■■□□□ 1.18
SRSF1-206ENST00000583741 BRCC3P46736 316 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 CSTF1Q05048 431 aaKnown RBP22.44■■□□□ 1.18
SRSF1-206ENST00000583741 SOX4Q06945 474 aaPredicted RBP22.44■■□□□ 1.18
SRSF1-206ENST00000583741 ATF7IP2Q5U623 682 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 TPRG1Q6ZUI0 275 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 CEP120Q8N960 986 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 CLIC4Q9Y696 253 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 F5P12259 2224 aa22.44■■□□□ 1.18
SRSF1-206ENST00000583741 EPG5Q9HCE0 2579 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 SHISA7A6NL88 538 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 SPTLC1O15269 473 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 ECI2O75521 394 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 CEBPBP17676 345 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 NASPP49321 788 aaPredicted RBP22.43■■□□□ 1.18
SRSF1-206ENST00000583741 PPP2R5AQ15172 486 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 ECM1Q16610 540 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 ZBTB41Q5SVQ8 909 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 ANKS3Q6ZW76 656 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 RTL10Q7L3V2 364 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 LEO1Q8WVC0 666 aaPredicted RBP22.43■■□□□ 1.18
SRSF1-206ENST00000583741 COL4A2P08572 1712 aa22.43■■□□□ 1.18
SRSF1-206ENST00000583741 YEATS4O95619 227 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 EFNA5P52803 228 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 ROR1Q01973 937 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 NBR1Q14596 966 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 SF3A1Q15459 793 aaKnown RBP22.42■■□□□ 1.18
SRSF1-206ENST00000583741 ERMNQ8TAM6 284 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 CLDN23Q96B33 292 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 UROC1Q96N76 676 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 HEBP1Q9NRV9 189 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 GDE1Q9NZC3 331 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 PCDHGA2Q9Y5H1 932 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 CITO14578 2027 aa22.42■■□□□ 1.18
SRSF1-206ENST00000583741 SMIM28A0A1B0GU29 152 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 PRPF40AO75400 957 aaKnown RBP22.41■■□□□ 1.18
SRSF1-206ENST00000583741 OR52Z1P0C646 297 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 STK38Q15208 465 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 TTC38Q5R3I4 469 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 VARS2Q5ST30 1063 aaKnown RBP22.41■■□□□ 1.18
SRSF1-206ENST00000583741 TANGO2Q6ICL3 276 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 SLC8B1Q6J4K2 584 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 TSSK4Q6SA08 328 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 ZBTB44Q8NCP5 570 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 BHMT2Q9H2M3 363 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 AVENQ9NQS1 362 aaPredicted RBP22.41■■□□□ 1.18
SRSF1-206ENST00000583741 RCOR1Q9UKL0 485 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 PCDHB6Q9Y5E3 794 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 ARHGEF37A1IGU5 675 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 WDR27A2RRH5 827 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 TRAPPC3O43617 180 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 PTMSP20962 102 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 FCARP24071 287 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 MAGEA9P43362 315 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 FZD5Q13467 585 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 ZNF174Q15697 407 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 RSPO4Q2I0M5 234 aaPredicted RBP22.41■■□□□ 1.18
SRSF1-206ENST00000583741 ZNF461Q8TAF7 563 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 NELL1Q92832 810 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 IFT74Q96LB3 600 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 NCDNQ9UBB6 729 aa22.41■■□□□ 1.18
SRSF1-206ENST00000583741 TPRP12270 2363 aaKnown RBP22.4■■□□□ 1.18
SRSF1-206ENST00000583741 TICRRQ7Z2Z1 1910 aa22.4■■□□□ 1.18
SRSF1-206ENST00000583741 NRG2O14511 850 aaPredicted RBP22.4■■□□□ 1.18
SRSF1-206ENST00000583741 ABLIM3O94929 683 aa22.4■■□□□ 1.18
SRSF1-206ENST00000583741 PRSS36Q5K4E3 855 aa22.4■■□□□ 1.18
SRSF1-206ENST00000583741 ALKAL1Q6UXT8 129 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms