RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 TMEM117Q9H0C3 514 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 ZBP1Q9H171 429 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 MUC3BQ9H195 1237 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 ELAC1Q9H777 363 aaKnown RBP8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 C1orf112Q9NSG2 853 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 GABBR1Q9UBS5 961 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 DNAJB4Q9UDY4 337 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 LZTS1Q9Y250 596 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 PCDHB12Q9Y5F1 795 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 COL4A2P08572 1712 aa8.9□□□□□ -0.98
PPP4R1-225ENST00000583438 GPR179Q6PRD1 2367 aa8.9□□□□□ -0.99
PPP4R1-225ENST00000583438 PRR23AA6NEV1 266 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 PROB1E7EW31 1015 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 F8W810 466 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 NID1P14543 1247 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 LAG3P18627 525 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 METAP2P50579 478 aaKnown RBP eCLIP8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 BCAR1P56945 870 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 PRKCEQ02156 737 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 NTRK3Q16288 839 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 ZNF484Q5JVG2 852 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 RARS2Q5T160 578 aaKnown RBP8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 EFCAB12Q6NXP0 572 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 B3GNT9Q6UX72 402 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 KSR1Q8IVT5 923 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 SUGP1Q8IWZ8 645 aaKnown RBP8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 METTL13Q8N6R0 699 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 MRPL43Q8N983 215 aaKnown RBP8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 RNF169Q8NCN4 708 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 C3orf58Q8NDZ4 430 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 CDCA3Q99618 268 aaPredicted RBP8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 UNC45AQ9H3U1 944 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 ATP6V0A4Q9HBG4 840 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 ENTPD7Q9NQZ7 604 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 SOX13Q9UN79 622 aa8.89□□□□□ -0.99
PPP4R1-225ENST00000583438 KLF18A0A0U1RQI7 1052 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 MSH4O15457 936 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 NARSO43776 548 aaKnown RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 USP17L7P0C7H9 530 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 CALM1P0DP23 149 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 CALM2P0DP24 149 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 CALM3P0DP25 149 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 DARSP14868 501 aaKnown RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 EPHA1P21709 976 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ITPKAP23677 461 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 SLC26A2P50443 739 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 INSM1Q01101 510 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 AP3B2Q13367 1082 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 PFKFB3Q16875 520 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 PRR16Q569H4 304 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ZNF746Q6NUN9 644 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 LINC00114Q6XXX2 140 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 FRMD5Q7Z6J6 570 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ZNF280BQ86YH2 543 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 LRRC43Q8N309 656 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 IL22RA1Q8N6P7 574 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ST13P5Q8NFI4 369 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 BSNDQ8WZ55 320 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 PHKBQ93100 1093 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ZNF558Q96NG5 402 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ZMYND12Q9H0C1 365 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 ADAM7Q9H2U9 754 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 NRDE2Q9H7Z3 1164 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 MINDY3Q9H8M7 445 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 WRAP73Q9P2S5 460 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 FAM8A1Q9UBU6 413 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 VTI1BQ9UEU0 232 aa8.88□□□□□ -0.99
PPP4R1-225ENST00000583438 NCOR2Q9Y618 2525 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 KMT2BQ9UMN6 2715 aaPredicted RBP8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 IGKV6-21A0A0C4DH24 114 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 A0A0U1RQF3 1178 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 GOLGA8AA7E2F4 631 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 GOLGA8BA8MQT2 603 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 ZBTB43O43298 467 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 DDHD2O94830 711 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 RPLP2P05387 115 aaKnown RBP8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 CIITAP33076 1130 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 NBL1P41271 181 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 SLC11A1P49279 550 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 FAM160B1Q5W0V3 765 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 KIAA1841Q6NSI8 718 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 TAS1R1Q7RTX1 841 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 TMTC2Q8N394 836 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 RSAD2Q8WXG1 361 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 ATOH1Q92858 354 aaPredicted RBP8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 PPP2R3CQ969Q6 453 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 AIFM3Q96NN9 605 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 ZNF577Q9BSK1 485 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 TBC1D13Q9NVG8 400 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 MARCH5Q9NX47 278 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 SPG21Q9NZD8 308 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 VPS54Q9P1Q0 977 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 SORCS3Q9UPU3 1222 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 AKT3Q9Y243 479 aa8.87□□□□□ -0.99
PPP4R1-225ENST00000583438 A0A087WZ62 844 aa8.86□□□□□ -0.99
PPP4R1-225ENST00000583438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.86□□□□□ -0.99
PPP4R1-225ENST00000583438 ESYT2A0FGR8 921 aa8.86□□□□□ -0.99
PPP4R1-225ENST00000583438 CHMP2AO43633 222 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms