RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 TRAPPC3O43617 180 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 B3GAT3O94766 335 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MUTP22033 750 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 EFNA5P52803 228 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PFKPQ01813 784 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PRKCQQ04759 706 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZNF174Q15697 407 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MLF2Q15773 248 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PABPC1LQ4VXU2 614 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RTL10Q7L3V2 364 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FMR1NBQ8N0W7 255 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FSIP1Q8NA03 581 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ITFG1Q8TB96 612 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 UROC1Q96N76 676 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 HINFPQ9BQA5 517 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 BCO2Q9BYV7 579 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TSPY26PQ9H489 355 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KCNH3Q9ULD8 1083 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 USP20Q9Y2K6 914 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CDY1Q9Y6F8 540 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 VWA8A3KMH1 1905 aa10.64□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CUTAO60888 179 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 EDN1P05305 212 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 GLULP15104 373 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MARCKSP29966 332 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CCT6AP40227 531 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CLCNKBP51801 687 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 YARSP54577 528 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FAM160A1Q05DH4 1040 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SLC44A4Q53GD3 710 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 GLRA4Q5JXX5 417 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ATF7IP2Q5U623 682 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SHC4Q6S5L8 630 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RSPO2Q6UXX9 243 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ANKS3Q6ZW76 656 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NPAS3Q8IXF0 933 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KIAA2013Q8IYS2 634 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KIFAP3Q92845 792 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PPP1R10Q96QC0 940 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KXD1Q9BQD3 176 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DDX23Q9BUQ8 820 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KIFC3Q9BVG8 833 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 OSBPL6Q9BZF3 934 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NUP62CLQ9H1M0 184 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SPATA6Q9NWH7 488 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 HCFC1R1Q9NWW0 138 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 DNMT3BQ9UBC3 853 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 HPSEQ9Y251 543 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PCDHB6Q9Y5E3 794 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 BACE2Q9Y5Z0 518 aa10.63□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MIA3Q5JRA6 1907 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TRIOO75962 3097 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 K7ERI5 159 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 LAMTOR5O43504 91 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 KINO60870 393 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 LRRN2O75325 713 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TKTP29401 623 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ELF1P32519 619 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 MAGEA9P43362 315 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 BRCC3P46736 316 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TRAPPC10P48553 1259 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NDUFA8P51970 172 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 UBXN2BQ14CS0 331 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CAMK4Q16566 473 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 UPP1Q16831 310 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TTC38Q5R3I4 469 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NT5DC1Q5TFE4 455 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ING5Q8WYH8 240 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RUBCNQ92622 972 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 BORCS6Q96GS4 357 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CCDC94Q9BW85 323 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PANK2Q9BZ23 570 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 BHMT2Q9H2M3 363 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 LTB4R2Q9NPC1 389 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TOPORSQ9NS56 1045 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FBXO4Q9UKT5 387 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 TNFSF13BQ9Y275 285 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PHLPP2Q6ZVD8 1323 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 SMIM28A0A1B0GU29 152 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FAM170BA6NMN3 283 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 I3L4J1 428 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 NCAM2O15394 837 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ECI2O75521 394 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 LRG1P02750 347 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RHOP08100 348 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 PTPN2P17706 415 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 GRM5P41594 1212 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 FXR2P51116 673 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZNF528Q3MIS6 628 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZNF568Q3ZCX4 644 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 ZBTB41Q5SVQ8 909 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 RESP18Q5W5W9 173 aa10.61□□□□□ -0.71
CDK5RAP3-227ENST00000583352 CD300LGQ6UXG3 332 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms