RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	EFS	O43281	561 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	LDLR	P01130	860 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	EGF	P01133	1207 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	VIPR2	P41587	438 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	CLDN6	P56747	220 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	SUZ12	Q15022	739 aa	Known RBP	5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	ARHGAP29	Q52LW3	1261 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	NOMO2	Q5JPE7	1267 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	SYDE2	Q5VT97	1194 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	RSRC2	Q7L4I2	434 aa	Known RBP	5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	PNMA5	Q96PV4	448 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	TAAR1	Q96RJ0	339 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	CCNL2	Q96S94	520 aa	Predicted RBP	5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	MMS19	Q96T76	1030 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	GAREM1	Q9H706	876 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	IL21R	Q9HBE5	538 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	ZSWIM6	Q9HCJ5	1215 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	PXMP2	Q9NR77	195 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	THSD1	Q9NS62	852 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	ERAP1	Q9NZ08	941 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	POLI	Q9UNA4	740 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	NFE2L3	Q9Y4A8	694 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	SHANK1	Q9Y566	2161 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	TDRD15	B5MCY1	1934 aa	Known RBP	5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	MYH6	P13533	1939 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	CNTNAP5	Q8WYK1	1306 aa		5.74	□□□□□ -1.49
MSI2-216	ENST00000582772	NRP1	O14786	923 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	TRIM66	O15016	1216 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	PAPSS1	O43252	624 aa	Predicted RBP	5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	PCDHGA12	O60330	932 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	IDH1	O75874	414 aa	Known RBP	5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	C4BPA	P04003	597 aa	Known RBP	5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	MATK	P42679	507 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	LSS	P48449	732 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	ACADVL	P49748	655 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	CDR1	P51861	262 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	CRYBB1	P53674	252 aa	Predicted RBP	5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	HDAC4	P56524	1084 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	PLCB2	Q00722	1185 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	TFCP2	Q12800	502 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	ILK	Q13418	452 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	MORC3	Q14149	939 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	NEDD9	Q14511	834 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	PTPA	Q15257	358 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	SGO2	Q562F6	1265 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	GLB1L	Q6UWU2	654 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	SLC36A4	Q6YBV0	504 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	KCTD1	Q719H9	257 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	YAF2	Q8IY57	180 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	AMOTL1	Q8IY63	956 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	FRMD1	Q8N878	549 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	SLC7A14	Q8TBB6	771 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	RSPRY1	Q96DX4	576 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	VCPIP1	Q96JH7	1222 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	NEUROD6	Q96NK8	337 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	P2RY13	Q9BPV8	354 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	USP44	Q9H0E7	712 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	RUBCNL	Q9H714	662 aa		5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
MSI2-216	ENST00000582772	SVEP1	Q4LDE5	3571 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	WDR64	B1ANS9	1081 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ZNF197	O14709	1029 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	SORBS3	O60504	671 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	NADK	O95544	446 aa	Predicted RBP	5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ALDH2	P05091	517 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	CD99	P14209	185 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	GNS	P15586	552 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ZSCAN20	P17040	1043 aa	Predicted RBP	5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	GLDC	P23378	1020 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	GHRHR	Q02643	423 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	CLN3	Q13286	438 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	TBR1	Q16650	682 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	CCDC96	Q2M329	555 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ITPRIPL2	Q3MIP1	535 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ARHGEF16	Q5VV41	709 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	HAUS6	Q7Z4H7	955 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	SLC41A1	Q8IVJ1	513 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	RNF169	Q8NCN4	708 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	CCDC26	Q8TAB7	109 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	RLN3	Q8WXF3	142 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ZBTB10	Q96DT7	871 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	ZSWIM3	Q96MP5	696 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	FUCA2	Q9BTY2	467 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	LATS2	Q9NRM7	1088 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	OBP2A	Q9NY56	170 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	FTSJ1	Q9UET6	329 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	PA2G4	Q9UQ80	394 aa	Known RBP	5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	CLCA2	Q9UQC9	943 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	NFASC	O94856	1347 aa		5.72	□□□□□ -1.49
MSI2-216	ENST00000582772	CYP2D7	A0A087X1C5	515 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	MTSS1	O43312	755 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	VPS4B	O75351	444 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	OFD1	O75665	1012 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	ALDH1A2	O94788	518 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	DDHD2	O94830	711 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	INSRR	P14616	1297 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	PTPN2	P17706	415 aa		5.71	□□□□□ -1.5
MSI2-216	ENST00000582772	EIF2AK2	P19525	551 aa	Known RBP	5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms