RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 DMTF1Q9Y222 760 aa4.94□□□□□ -1.62
SMCHD1-206ENST00000581631 A0A087X0B3 334 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 PROM1O43490 865 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 ITPKBP27987 946 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 PCSK1P29120 753 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 SLC6A9P48067 706 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 MAPK10P53779 464 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 NOMO3P69849 1222 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 SSBP2P81877 361 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 NOMO1Q15155 1222 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 MUM1Q2TAK8 710 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 NOMO2Q5JPE7 1267 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 ZNF529Q6P280 563 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 VWA1Q6PCB0 445 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 MFSD3Q96ES6 412 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 MARS2Q96GW9 593 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 HEPHQ9BQS7 1158 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 GREM2Q9H772 168 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 LANCL2Q9NS86 450 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 FANCLQ9NW38 375 aa4.93□□□□□ -1.62
SMCHD1-206ENST00000581631 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 SRGNP10124 158 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 SF3B3Q15393 1217 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 CCDC144BQ3MJ40 725 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 PEG10Q86TG7 708 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 COLGALT2Q8IYK4 626 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 HASPINQ8TF76 798 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 NUP133Q8WUM0 1156 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 STON2Q8WXE9 905 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 APPBP2Q92624 585 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 MED15Q96RN5 788 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 DMRT3Q9NQL9 472 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 RBM12Q9NTZ6 932 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 PLAAQ9Y263 795 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 AOX1Q06278 1338 aa4.92□□□□□ -1.62
SMCHD1-206ENST00000581631 WDR91A4D1P6 747 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 MPPED1O15442 326 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 PEX1O43933 1283 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 ID4P47928 161 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 CCT2P78371 535 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 SEPT2Q15019 361 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 FOXR2Q6PJQ5 311 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 GRASPQ7Z6J2 395 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 AUTS2Q8WXX7 1259 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 FATE1Q969F0 183 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 PNKPQ96T60 521 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 LDAHQ9H6V9 325 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 IFT122Q9HBG6 1241 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 VSX1Q9NZR4 365 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 AJAP1Q9UKB5 411 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 MTO1Q9Y2Z2 717 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 ACTL7AQ9Y615 435 aa4.91□□□□□ -1.62
SMCHD1-206ENST00000581631 A0A1W2PS29 197 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 MANSC4A6NHS7 340 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 KCNAB3O43448 404 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 FCER1AP12319 257 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 MCAMP43121 646 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 SESN3P58005 492 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 ATP8B2P98198 1209 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 MTM1Q13496 603 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 DHCR24Q15392 516 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 ANO4Q32M45 955 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 AKNAD1Q5T1N1 836 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 UBE3BQ7Z3V4 1068 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 CMIPQ8IY22 773 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 LMBR1Q8WVP7 490 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 DDB2Q92466 427 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 FEZ1Q99689 392 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 SENP6Q9GZR1 1112 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 ADAM21Q9UKJ8 722 aa4.9□□□□□ -1.63
SMCHD1-206ENST00000581631 TRGV11A0A075B6L2 103 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 CCDC151A5D8V7 595 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 NEMP1O14524 444 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 YY2O15391 372 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 ULK1O75385 1050 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 AMY1AP04745 511 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 GRIA3P42263 894 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 MGAT2Q10469 447 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 KRTAP5-11Q6L8G4 156 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 KIAA0907Q7Z7F0 614 aaPredicted RBP4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 LEO1Q8WVC0 666 aaPredicted RBP4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 QRSL1Q9H0R6 528 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 CPNE5Q9HCH3 593 aa4.89□□□□□ -1.63
SMCHD1-206ENST00000581631 CDHR4A6H8M9 788 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 TEX33O43247 280 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 ENDOD1O94919 500 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 PRKCGP05129 697 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 GPD1P21695 349 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 SOX10P56693 466 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 NBPF8Q3BBV2 869 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 MUM1L1Q5H9M0 696 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 KIAA1614Q5VZ46 1190 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 FITM2Q8N6M3 262 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 TMEM140Q9NV12 185 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 FLRT1Q9NZU1 646 aa4.88□□□□□ -1.63
SMCHD1-206ENST00000581631 WDR27A2RRH5 827 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 TP73O15350 636 aa4.87□□□□□ -1.63
SMCHD1-206ENST00000581631 ALAS1P13196 640 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms