RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 POMGNT1Q8WZA1 660 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 C18orf25Q96B23 403 aaPredicted RBP13.74□□□□□ -0.21
SNORD55-201ENST00000581525 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 CACNG4Q9UBN1 327 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 HCFC2Q9Y5Z7 792 aa13.74□□□□□ -0.21
SNORD55-201ENST00000581525 TRIP11Q15643 1979 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.73□□□□□ -0.21
SNORD55-201ENST00000581525 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 PODXLO00592 558 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 MBTPS2O43462 519 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 XPOTO43592 962 aaKnown RBP13.73□□□□□ -0.21
SNORD55-201ENST00000581525 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 EXTL3O43909 919 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 B3GAT3O94766 335 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 IL18RAPO95256 599 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 URODP06132 367 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
SNORD55-201ENST00000581525 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNORD55-201ENST00000581525 ACOT2P49753 483 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 KCNQ1P51787 676 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 CLCN4P51793 760 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 SMAD2Q15796 467 aaKnown RBP13.73□□□□□ -0.21
SNORD55-201ENST00000581525 KMT5BQ4FZB7 885 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 ANKRD54Q6NXT1 300 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 PDXDC1Q6P996 788 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 SYCE2Q6PIF2 218 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
SNORD55-201ENST00000581525 SYCP3Q8IZU3 236 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 ZSWIM2Q8NEG5 633 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 SUSD6Q92537 303 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 RABGGTAQ92696 567 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 CASP10Q92851 521 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 TTPALQ9BTX7 342 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 EMILIN2Q9BXX0 1053 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 KIAA1586Q9HCI6 787 aa13.73□□□□□ -0.21
SNORD55-201ENST00000581525 H3BQ06 376 aaPredicted RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 M0QZQ0 153 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 PIRO00625 290 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 SYN3O14994 580 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 TEX28O15482 410 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 RPN1P04843 607 aaKnown RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 ANP32AP39687 249 aaKnown RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 CREMQ03060 361 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 SMAD4Q13485 552 aaKnown RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 KNOP1Q1ED39 458 aaKnown RBP13.72□□□□□ -0.21
SNORD55-201ENST00000581525 RTP2Q5QGT7 225 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 KIAA0895Q8NCT3 520 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 SUSD3Q96L08 255 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 CBWD1Q9BRT8 395 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 SLC39A2Q9NP94 309 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 CD207Q9UJ71 328 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 CITO14578 2027 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
SNORD55-201ENST00000581525 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 NDUFV1P49821 464 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 MYBPC2Q14324 1141 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 FAM171A1Q5VUB5 890 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 PTCRAQ6ISU1 281 aaPredicted RBP13.71□□□□□ -0.21
SNORD55-201ENST00000581525 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 GPD1LQ8N335 351 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 CMASQ8NFW8 434 aaPredicted RBP13.71□□□□□ -0.21
SNORD55-201ENST00000581525 CXorf38Q8TB03 319 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 CLSTN3Q9BQT9 956 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
SNORD55-201ENST00000581525 KCTD10Q9H3F6 313 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 AGPAT3Q9NRZ7 376 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
SNORD55-201ENST00000581525 FAM50BQ9Y247 325 aa13.71□□□□□ -0.21
SNORD55-201ENST00000581525 PDCD11Q14690 1871 aaKnown RBP13.7□□□□□ -0.22
SNORD55-201ENST00000581525 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 PDXKO00764 312 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 CSPG5O95196 566 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 ADH1AP07327 375 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 SRGAP2BP0DMP2 458 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 EPCAMP16422 314 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 KLRC2P26717 231 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 BRCC3P46736 316 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 WNT7BP56706 349 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 ITIH3Q06033 890 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 RAB33AQ14088 237 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 TMEM132DQ14C87 1099 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 NFIL3Q16649 462 aa13.7□□□□□ -0.22
SNORD55-201ENST00000581525 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms