RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 TDRD10Q5VZ19 366 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GBP6Q6ZN66 633 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ABI1Q8IZP0 508 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 C1orf127Q8N9H9 656 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 LMO3Q8TAP4 145 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 CXorf38Q8TB03 319 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 URGCPQ8TCY9 931 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ZNF689Q96CS4 500 aaPredicted RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MRFAP1L1Q96HT8 127 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ERGIC2Q96RQ1 377 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MTIF3Q9H2K0 278 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RAB20Q9NX57 234 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ITGA11Q9UKX5 1188 aa9.89□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ANO9A1A5B4 782 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ZBBXA8MT70 800 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PIRO00625 290 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 HLA-DRAP01903 254 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ATICP31939 592 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RPL9P32969 192 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PBX1P40424 430 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MYL7Q01449 175 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SOX4Q06945 474 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TUSC3Q13454 348 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 BIRC3Q13489 604 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TRPC3Q13507 836 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 EXOC3L4Q17RC7 722 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SGSM1Q2NKQ1 1148 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GLRA4Q5JXX5 417 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 DPY19L2P1Q6NXN4 242 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 FBXL13Q8NEE6 735 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TAS1R2Q8TE23 839 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TAF4BQ92750 862 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SEMA4DQ92854 862 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 FAM84AQ96KN4 292 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 UROC1Q96N76 676 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 CRACR2AQ9BSW2 395 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MRPL9Q9BYD2 267 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TBC1D13Q9NVG8 400 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SIX4Q9UIU6 781 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PLAGL2Q9UPG8 496 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 AGAP1Q9UPQ3 857 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 INPP5FQ9Y2H2 1132 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 R3HCC1Q9Y3T6 440 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SLC4A7Q9Y6M7 1214 aa9.88□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TBKBP1A7MCY6 615 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 H0YGN5 161 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 DDHD2O94830 711 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ADCY5O95622 1261 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 STAU1O95793 577 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ALDH2P05091 517 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ITGB3P05106 788 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SLC9A1P19634 815 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PAX3P23760 479 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PON1P27169 355 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GATMP50440 423 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 MYL6P60660 151 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RNASELQ05823 741 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 DSC1Q08554 894 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 NCOA4Q13772 614 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SYCP1Q15431 976 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 C9orf57Q5W0N0 161 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SCARA3Q6AZY7 606 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 DCLRE1AQ6PJP8 1040 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ZNF280BQ86YH2 543 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 VSTM4Q8IW00 320 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 COLGALT2Q8IYK4 626 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 CMTR2Q8IYT2 770 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 FAXDC2Q96IV6 333 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 FAM193BQ96PV7 902 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SLC9A7Q96T83 725 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GDF15Q99988 308 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TMEM175Q9BSA9 504 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 INTS2Q9H0H0 1204 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 NRDE2Q9H7Z3 1164 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RC3H2Q9HBD1 1191 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PLCB1Q9NQ66 1216 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 TUBGCP4Q9UGJ1 667 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SIK3Q9Y2K2 1263 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PDCD11Q14690 1871 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 RALGAPA2Q2PPJ7 1873 aa9.87□□□□□ -0.83
CDK5RAP3-220ENST00000581160 LRRN2O75325 713 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 GJB5O95377 273 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 ASS1P00966 412 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 KRT19P08727 400 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 CDC25BP30305 580 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 POLR2BP30876 1174 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 BMP8BP34820 402 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PNPLA4P41247 253 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 PIK3CAP42336 1068 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 HTRA4P83105 476 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 SHHQ15465 462 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 UPP1Q16831 310 aa9.86□□□□□ -0.83
CDK5RAP3-220ENST00000581160 WDR44Q5JSH3 913 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms