RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 RSPH3Q86UC2 560 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 RTN4RL1Q86UN2 441 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FAM126BQ8IXS8 530 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NME8Q8N427 588 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 UBR7Q8N806 425 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 RNF169Q8NCN4 708 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZNF397Q8NF99 534 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 U2AF1L4Q8WU68 220 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KIF12Q96FN5 646 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ACAP3Q96P50 834 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PCDHB18PQ96TA0 734 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SYT11Q9BT88 431 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CCDC94Q9BW85 323 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 STK33Q9BYT3 514 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 EDEM3Q9BZQ6 932 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 LACRTQ9GZZ8 138 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SMYD3Q9H7B4 428 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZNHIT6Q9NWK9 470 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 MIOSQ9NXC5 875 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 AIPL1Q9NZN9 384 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 HMGXB4Q9UGU5 601 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CHORDC1Q9UHD1 332 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PCDHB2Q9Y5E7 798 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 EPN1Q9Y6I3 576 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 DUSP10Q9Y6W6 482 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PLXNA1Q9UIW2 1896 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TMCO5BA8MYB1 307 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 F8W810 466 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SPTLC1O15269 473 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 B4GALT3O60512 393 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NBNO60934 754 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 IL18RAPO95256 599 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ASS1P00966 412 aaKnown RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TNNC2P02585 160 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TFRCP02786 760 aaKnown RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SERPING1P05155 500 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 WEE2P0C1S8 567 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KRT5P13647 590 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CD58P19256 250 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CLCN1P35523 988 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 MLH1P40692 756 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ASPAP45381 313 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GATMP50440 423 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CDH8P55286 799 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CCL23P55773 120 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TLE2Q04725 743 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PTPN11Q06124 597 aaPredicted RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ENPEPQ07075 957 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PAK2Q13177 524 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 MAPK8IP2Q13387 824 aaPredicted RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CUL2Q13617 745 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CCDC142Q17RM4 750 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 DUOXA2Q1HG44 320 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TSR1Q2NL82 804 aaKnown RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZNF699Q32M78 642 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FBXO46Q6PJ61 603 aaPredicted RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 AGMOQ6ZNB7 445 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SLC47A2Q86VL8 602 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GLYCTKQ8IVS8 523 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FAM71AQ8IYT1 594 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SHC3Q92529 594 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SYN2Q92777 582 aaPredicted RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ARMC5Q96C12 935 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SCLYQ96I15 445 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ANKRD36BP1Q96IX9 119 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TWNKQ96RR1 684 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 WDR24Q96S15 920 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GAD1Q99259 594 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ADAM2Q99965 735 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 LPIN3Q9BQK8 851 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZSWIM1Q9BR11 485 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ADPGKQ9BRR6 497 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PPP1R12CQ9BZL4 782 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TRIM6Q9C030 488 aaPredicted RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CRISPLD2Q9H0B8 497 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 LZTFL1Q9NQ48 299 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 C1orf112Q9NSG2 853 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NXF1Q9UBU9 619 aaKnown RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SALL4Q9UJQ4 1053 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NOCTQ9UK39 431 aaKnown RBP6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FBXL5Q9UKA1 691 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NENFQ9UMX5 172 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 AGAP1Q9UPQ3 857 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PAXBP1Q9Y5B6 917 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NME7Q9Y5B8 376 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PCDHB4Q9Y5E5 795 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KIAA1217Q5T5P2 1943 aa6.62□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SMIM28A0A1B0GU29 152 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 EIF3CLB5ME19 914 aaKnown RBP6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 AKR1B10O60218 316 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CD4P01730 458 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 MMEP08473 750 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TNNT1P13805 278 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FERP16591 822 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 BRD2P25440 801 aaKnown RBP6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 AXLP30530 894 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CYP2C18P33260 490 aa6.61□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PRKCIP41743 596 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms