RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CCZ1BP86790 482 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TRPC3Q13507 836 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 GPNMBQ14956 572 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ARHGEF19Q8IW93 802 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CCDC112Q8NEF3 446 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ELMO3Q96BJ8 720 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SCLYQ96I15 445 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZMAT2Q96NC0 199 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SPAG5Q96R06 1193 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 BAG1Q99933 345 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NAA15Q9BXJ9 866 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 UBE2TQ9NPD8 197 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZNHIT6Q9NWK9 470 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DERAQ9Y315 318 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DAAM1Q9Y4D1 1078 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 A0A0U1RQF3 1178 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZNF623O75123 536 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CST3P01034 146 aaPredicted RBP14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SKIP12755 728 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 GLRA4Q5JXX5 417 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SCARA3Q6AZY7 606 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MRPL10Q7Z7H8 261 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PPM1KQ8N3J5 372 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 C1orf127Q8N9H9 656 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RNF169Q8NCN4 708 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 LPPQ93052 612 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 FTHL17Q9BXU8 183 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 IMPG2Q9BZV3 1241 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NUCKS1Q9H1E3 243 aaKnown RBP14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RGS18Q9NS28 235 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 C1orf112Q9NSG2 853 aa14.91□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MEIS3P2A8K0S8 358 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PARNO95453 639 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 KRT19P08727 400 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MYL6P60660 151 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DRAP1Q14919 205 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ARHGAP44Q17R89 818 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PLEKHG4Q58EX7 1191 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 XKR4Q5GH76 650 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SFMBT2Q5VUG0 894 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RTN4RL1Q86UN2 441 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TMEM139Q8IV31 216 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TMEM130Q8N3G9 435 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DBF4BQ8NFT6 615 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SEPT8Q92599 483 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TATDN2Q93075 761 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 STK33Q9BYT3 514 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RNF19AQ9NV58 838 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SIX4Q9UIU6 781 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PRDM4Q9UKN5 801 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TANC1Q9C0D5 1861 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ITGB3P05106 788 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 KCNE1P15382 129 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 GUCY2FP51841 1108 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MFAP3P55082 362 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 JAM2P57087 298 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NOP14P78316 857 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SGSM1Q2NKQ1 1148 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SPOPLQ6IQ16 392 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 AGMOQ6ZNB7 445 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SLC24A5Q71RS6 500 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ECHDC2Q86YB7 292 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 GPIHBP1Q8IV16 184 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 BEST2Q8NFU1 509 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 HELQQ8TDG4 1101 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 LINC01599Q8WXQ3 324 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 KAT5Q92993 513 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PGBD4Q96DM1 585 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZFP42Q96MM3 310 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TSPAN18Q96SJ8 248 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ITGA11Q9UKX5 1188 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PLAGL2Q9UPG8 496 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 GIT1Q9Y2X7 761 aa14.9□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ASS1P00966 412 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ATF7P17544 494 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FECHP22830 423 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 HNRNPH3P31942 346 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 MLH1P40692 756 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ZBTB6Q15916 424 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 MEA1Q16626 185 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 WDR59Q6PJI9 974 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CYP26C1Q6V0L0 522 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SYN2Q92777 582 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 APBB2Q92870 758 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 C18orf25Q96B23 403 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 RPS6KC1Q96S38 1066 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GAD1Q99259 594 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 APOBEC3GQ9HC16 384 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PRDM5Q9NQX1 630 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TUBGCP4Q9UGJ1 667 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 UBQLN1Q9UMX0 589 aaKnown RBP14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SCN5AQ14524 2016 aa14.89□□□□□ -0.03
CDK5RAP3-219ENST00000580670 C9IYK1 514 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms