RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 KRT31Q15323 416 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 RAB30Q15771 203 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 GLRA4Q5JXX5 417 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 DCLRE1AQ6PJP8 1040 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 SV2AQ7L0J3 742 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 TRAPPC11Q7Z392 1133 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 ZMAT2Q96NC0 199 aaKnown RBP15.42■□□□□ 0.06
SKA2-205ENST00000580541 NDST4Q9H3R1 872 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 MIOSQ9NXC5 875 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 STK39Q9UEW8 545 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 FAN1Q9Y2M0 1017 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 PCDHB12Q9Y5F1 795 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 PCDHA11Q9Y5I1 949 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 TDRD15B5MCY1 1934 aaKnown RBP15.42■□□□□ 0.06
SKA2-205ENST00000580541 GTPBP10A4D1E9 387 aaKnown RBP15.41■□□□□ 0.06
SKA2-205ENST00000580541 TRAPPC3O43617 180 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 C4BPAP04003 597 aaKnown RBP15.41■□□□□ 0.06
SKA2-205ENST00000580541 KRT19P08727 400 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 LAG3P18627 525 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 LRPAP1P30533 357 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 ATICP31939 592 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 GCLMP48507 274 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 FMO5P49326 533 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 COPB1P53618 953 aaKnown RBP15.41■□□□□ 0.06
SKA2-205ENST00000580541 DLG4P78352 724 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 SGSM1Q2NKQ1 1148 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 ZACNQ401N2 412 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 PAN2Q504Q3 1202 aaKnown RBP15.41■□□□□ 0.06
SKA2-205ENST00000580541 WDR44Q5JSH3 913 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 EFCAB13Q8IY85 973 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 FBXL13Q8NEE6 735 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 TAF4BQ92750 862 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 ZNF560Q96MR9 790 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 MTMR12Q9C0I1 747 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 RBSNQ9H1K0 784 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 VPS16Q9H269 839 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 MMRN2Q9H8L6 949 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 RALGAPA2Q2PPJ7 1873 aa15.41■□□□□ 0.06
SKA2-205ENST00000580541 ANK1P16157 1881 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 FNDC1Q4ZHG4 1894 aaPredicted RBP15.4■□□□□ 0.06
SKA2-205ENST00000580541 TRIM49P0CI25 452 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 TRIM49CP0CI26 452 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 P4HA1P13674 534 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 OR1G1P47890 313 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 UBASH3AP57075 661 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 FANCCQ00597 558 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 MYL7Q01449 175 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 PPP3CAQ08209 521 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 DSC1Q08554 894 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 NCOA4Q13772 614 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 GBP6Q6ZN66 633 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 GAS2L3Q86XJ1 694 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 LRRC52Q8N7C0 313 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 OR5B17Q8NGF7 314 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 PLEKHO2Q8TD55 490 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 ZNF516Q92618 1163 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 C18orf25Q96B23 403 aaPredicted RBP15.4■□□□□ 0.06
SKA2-205ENST00000580541 FAM81BQ96LP2 452 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 SAMD11Q96NU1 681 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 HSD3B7Q9H2F3 369 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 NRDE2Q9H7Z3 1164 aa15.4■□□□□ 0.06
SKA2-205ENST00000580541 MEFVO15553 781 aaPredicted RBP15.39■□□□□ 0.05
SKA2-205ENST00000580541 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
SKA2-205ENST00000580541 TADA2AO75478 443 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 B3GAT3O94766 335 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 CLSTN1O94985 981 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 ITGB3P05106 788 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 ATP1A3P13637 1013 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 PPM1AP35813 382 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 PIK3CAP42336 1068 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 GATMP50440 423 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 AFF1P51825 1210 aaKnown RBP15.39■□□□□ 0.05
SKA2-205ENST00000580541 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 UBXN1Q04323 297 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 KRT17Q04695 432 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 ELAVL2Q12926 359 aaKnown RBP15.39■□□□□ 0.05
SKA2-205ENST00000580541 UPP1Q16831 310 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 SV2CQ496J9 727 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 C1orf220Q5T0J3 134 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 C9orf57Q5W0N0 161 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
SKA2-205ENST00000580541 C15orf39Q6ZRI6 1047 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 C1orf127Q8N9H9 656 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
SKA2-205ENST00000580541 FAXDC2Q96IV6 333 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 RC3H2Q9HBD1 1191 aaKnown RBP15.39■□□□□ 0.05
SKA2-205ENST00000580541 RAB20Q9NX57 234 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 TAB2Q9NYJ8 693 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 PCDH10Q9P2E7 1040 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 PLAGL2Q9UPG8 496 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 AGAP1Q9UPQ3 857 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 COQ4Q9Y3A0 265 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 NUB1Q9Y5A7 615 aa15.39■□□□□ 0.05
SKA2-205ENST00000580541 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 GOLGA6L3A6NEY3 463 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 CASTOR2A6NHX0 329 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 LGALS16A8MUM7 142 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms