RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 MSRAQ9UJ68 235 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 TET1Q8NFU7 2136 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 COL4A6Q14031 1691 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 CITO14578 2027 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 LRRC10BA6NIK2 292 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 PTGESO14684 152 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 TRAPPC3O43617 180 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 ALDH2P05091 517 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 NFICP08651 508 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 KRT19P08727 400 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 LRPAP1P30533 357 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 ATICP31939 592 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 PIK3CAP42336 1068 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 FMO5P49326 533 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 MYL7Q01449 175 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 KRT31Q15323 416 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 SHHQ15465 462 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 FAM117BQ6P1L5 589 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 GBP6Q6ZN66 633 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 TRAPPC11Q7Z392 1133 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 IRF2BP1Q8IU81 584 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 LRRC52Q8N7C0 313 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 FBXL13Q8NEE6 735 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 SAMD11Q96NU1 681 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 COLEC11Q9BWP8 271 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 MTMR12Q9C0I1 747 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 NDST4Q9H3R1 872 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 CXXC1Q9P0U4 656 aaPredicted RBP12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 DAAM1Q9Y4D1 1078 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 PCDHB12Q9Y5F1 795 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
SNORD3C-201ENST00000580533 MEIS3P2A8K0S8 358 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ESPNB1AK53 854 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ZC3H11AO75152 810 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 TRIM49P0CI25 452 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 TRIM49CP0CI26 452 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 TRIM21P19474 475 aaKnown RBP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 GCLMP48507 274 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 COPB1P53618 953 aaKnown RBP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ELAVL2Q12926 359 aaKnown RBP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 SGSM1Q2NKQ1 1148 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ZACNQ401N2 412 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 SV2CQ496J9 727 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 SV2AQ7L0J3 742 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 EFCAB13Q8IY85 973 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 GSTCDQ8NEC7 633 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 IQCDQ96DY2 449 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 FAXDC2Q96IV6 333 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ZMAT2Q96NC0 199 aaKnown RBP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 MMRN2Q9H8L6 949 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 RC3H2Q9HBD1 1191 aaKnown RBP12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 RNF19AQ9NV58 838 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 TAB2Q9NYJ8 693 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 NUB1Q9Y5A7 615 aa12.67□□□□□ -0.38
SNORD3C-201ENST00000580533 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 PODXLO00592 558 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 ITGB3P05106 788 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 RFX1P22670 979 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 OR1G1P47890 313 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 TAF6P49848 677 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 UBASH3AP57075 661 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 DLG4P78352 724 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 FANCCQ00597 558 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 UBXN1Q04323 297 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 DSC1Q08554 894 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 NCOA4Q13772 614 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 BMS1Q14692 1282 aaKnown RBP12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 EXOC3L4Q17RC7 722 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 DCLRE1AQ6PJP8 1040 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 TTC39CQ8N584 583 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 POP1Q99575 1024 aaKnown RBP12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 VPS16Q9H269 839 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 FAM124BQ9H5Z6 455 aaPredicted RBP12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 FAN1Q9Y2M0 1017 aa12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 MKI67P46013 3256 aaKnown RBP12.66□□□□□ -0.38
SNORD3C-201ENST00000580533 CASTOR2A6NHX0 329 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 TMEM189-UBE2V1I3L0A0 370 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 STAU1O95793 577 aaKnown RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 C4BPAP04003 597 aaKnown RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 POLR2BP30876 1174 aaKnown RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 YWHAEP62258 255 aaKnown RBP12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 TNNC1P63316 161 aa12.65□□□□□ -0.38
SNORD3C-201ENST00000580533 KRT17Q04695 432 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms